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SCNpilot_cont_300_bf_scaffold_102_curated

Search features with annotation key words

Displaying items 1-30 of 177 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_102_curated_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3..83
DNA (81bp) protein (27aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003601EBD
Uncharacterized protein {ECO:0000313|EMBL:AKD55754.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_102_curated_2
unknown

Not on your lists

comp(387..1142)
DNA (756bp) protein (252aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_102_curated_3
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1432..2781
DNA (1350bp) protein (450aa)
histidine kinase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003647D5E
Histidine kinase {ECO:0000313|EMBL:AKD55755.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
signal transduction histidine kinase LytS
SCNpilot_cont_300_bf_scaffold_102_curated_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2911..3891)
DNA (981bp) protein (327aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
epimerase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035FBC3E
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CCH55168.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_300_bf_scaffold_102_curated_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4136..5467)
DNA (1332bp) protein (444aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22]
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ADB39533.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ADB39533.1};; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
UDP-glucose 6-dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E2F08
SCNpilot_cont_300_bf_scaffold_102_curated_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5831..6970
DNA (1140bp) protein (380aa)
acyl-CoA dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI000369D2E5
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AKD56779.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_cont_300_bf_scaffold_102_curated_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7047..7289)
DNA (243bp) protein (81aa)
membrane protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000365336F
transglycosylase
Membrane protein {ECO:0000313|EMBL:AKD56780.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_102_curated_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7371..8141)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D5BDD
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein; K05810 conserved hypothetical protein
SCNpilot_cont_300_bf_scaffold_102_curated_9
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8354..8755
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035C2630
Uncharacterized protein {ECO:0000313|EMBL:AKD57265.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_102_curated_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8875..10611)
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036EB6D3
Uncharacterized protein {ECO:0000313|EMBL:CCH53124.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_102_curated_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11028..12851
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036BCFBD
Uncharacterized protein {ECO:0000313|EMBL:AKD56085.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_102_curated_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13043..16588
DNA (3546bp) protein (1182aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003743C7B
polymorphic membrane protein
Polymorphic membrane protein {ECO:0000313|EMBL:ADB36683.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_102_curated_13
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(16675..17559)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036810D5
NAD-dependent dehydratase {ECO:0000313|EMBL:KIF29999.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
NmrA family protein
SCNpilot_cont_300_bf_scaffold_102_curated_14
unknown

Not on your lists

17596..17946
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_102_curated_15
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17781..18707)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003622752
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJL73605.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_102_curated_16
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18905..19315)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A0AC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41868.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_102_curated_17
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19442..19783
DNA (342bp) protein (114aa)
HxlR family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI000367AD1B
HxlR family transcriptional regulator {ECO:0000313|EMBL:KEO74230.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
HxlR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_102_curated_18
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20432..20806
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003697D32
Uncharacterized protein {ECO:0000313|EMBL:AKD56491.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_102_curated_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20860..21705)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000360836E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42392.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_102_curated_20
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21830..22270
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003787535
Aminoglycoside N(6')-acetyltransferase type 1
Aminoglycoside N(6')-acetyltransferase type 1 {ECO:0000313|EMBL:CCH02732.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_102_curated_21
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22588..23655
DNA (1068bp) protein (356aa)
DNA topoisomerase (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase I n=1 Tax=Spirosoma panaciterrae RepID=UPI00036896A7
DNA topoisomerase I {ECO:0000313|EMBL:AKD56413.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_102_curated_22
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23699..25087)
DNA (1389bp) protein (463aa)
transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI000370BB44
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADB39244.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_102_curated_23
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25200..26831
DNA (1632bp) protein (544aa)
amidohydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI000380D36F
amidohydrolase; K07047
Amidohydrolase {ECO:0000313|EMBL:AKD56416.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_102_curated_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27009..27467)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F8DC8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39246.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_102_curated_25
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27469..29181)
DNA (1713bp) protein (571aa)
GMC family oxidoreductase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003755604
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ADB36518.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
glucose-methanol-choline oxidoreductase
SCNpilot_cont_300_bf_scaffold_102_curated_26
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29308..30162
DNA (855bp) protein (285aa)
short-chain dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003670711
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB36517.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_102_curated_27
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30273..31136
DNA (864bp) protein (288aa)
short-chain dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036EE4D7
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB36516.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_102_curated_28
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31199..32560
DNA (1362bp) protein (454aa)
cytochrome P450 n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F0C71
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:AKD54469.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_102_curated_29
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32768..33145
DNA (378bp) protein (126aa)
30S ribosomal protein S30 n=1 Tax=Spirosoma panaciterrae RepID=UPI00036BF59F
30S ribosomal protein S30 {ECO:0000313|EMBL:AKD54468.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_102_curated_30
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33280..34557)
DNA (1278bp) protein (426aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthetase n=1 Tax=Spirosoma panaciterrae RepID=UPI000363A73D
Displaying items 1-30 of 177 in total

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