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SCNpilot_cont_300_bf_scaffold_101_curated_47

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(43659..44012)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Spirosoma panaciterrae RepID=UPI000362EB3E similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 117.0
  • Bit_score: 220
  • Evalue 7.00e-55
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 117.0
  • Bit_score: 217
  • Evalue 2.50e-54
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 117.0
  • Bit_score: 217
  • Evalue 1.10e-53

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 354
ATGGCAACGAATAAACAAGAAAGAAGACAGCGGATCAAGTACGGTATCCGGGCAAAAGTATCGGGTACGGCAGAACGTCCTCGCCTGTCGGTGTTCCGCTCTAACAAAGCGATCTACGCTCAATTAATTGATGATCTTGCAGGTCGTACACTTGCATTTGCCTCATCGGTTGAATTGAAAAGCGAAGCCGAAGGAAATACAATCGAAACGGCGAAAAAAGTAGGCCAGCGCCTGGCCGAGAAAGCAGTTGCTCAGAACATTAGCACGGCTGTGTTCGACCGTAACGGCTACTTATATCACGGTAAAGTAAAAGCACTGGCCGATGCAGCCCGCGAGGGTGGCCTTAAGTTCTAA
PROTEIN sequence
Length: 118
MATNKQERRQRIKYGIRAKVSGTAERPRLSVFRSNKAIYAQLIDDLAGRTLAFASSVELKSEAEGNTIETAKKVGQRLAEKAVAQNISTAVFDRNGYLYHGKVKALADAAREGGLKF*