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SCNpilot_cont_300_bf_scaffold_101_curated

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Displaying items 31-60 of 286 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_101_curated_31
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31281..32720)
DNA (1440bp) protein (480aa)
galactonate dehydratase (EC:4.2.1.6)
Galactonate dehydratase {ECO:0000313|EMBL:ADB42032.1}; EC=4.2.1.6 {ECO:0000313|EMBL:ADB42032.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
mandelate racemase n=1 Tax=Spirosoma panaciterrae RepID=UPI000365AC9F
SCNpilot_cont_300_bf_scaffold_101_curated_32
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32834..33799
DNA (966bp) protein (322aa)
demethylmenaquinone methyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI000369F8E5
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:AKD57288.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
demethylmenaquinone methyltransferase
SCNpilot_cont_300_bf_scaffold_101_curated_33
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33910..34842
DNA (933bp) protein (311aa)
demethylmenaquinone methyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037141DF
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:AKD57289.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
demethylmenaquinone methyltransferase
SCNpilot_cont_300_bf_scaffold_101_curated_34
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34999..36102)
DNA (1104bp) protein (368aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
carbamoyl phosphate synthase small subunit n=1 Tax=Spirosoma panaciterrae RepID=UPI000361D314
SCNpilot_cont_300_bf_scaffold_101_curated_35
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(36185..36967)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003798C54
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_101_curated_36
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37052..38020)
DNA (969bp) protein (323aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha n=1 Tax=Spirosoma panaciterrae RepID=UPI000360A227
SCNpilot_cont_300_bf_scaffold_101_curated_37
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(38178..38783)
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C8710
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
SCNpilot_cont_300_bf_scaffold_101_curated_38
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(38861..39256)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F1614
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
SCNpilot_cont_300_bf_scaffold_101_curated_39
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(39357..39734)
DNA (378bp) protein (126aa)
30S ribosomal protein S13 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003710667
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
SCNpilot_cont_300_bf_scaffold_101_curated_40
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(39737..39853)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1Z3_DYAFD
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_300_bf_scaffold_101_curated_41
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(39950..40168)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=3 Tax=Cytophagaceae RepID=D2QSE8_SPILD
translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_101_curated_42
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(40175..41014)
DNA (840bp) protein (280aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
methionine aminopeptidase n=1 Tax=Spirosoma panaciterrae RepID=UPI000380C415
SCNpilot_cont_300_bf_scaffold_101_curated_43
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(41020..42336)
DNA (1317bp) protein (439aa)
preprotein translocase subunit SecY n=1 Tax=Spirosoma panaciterrae RepID=UPI000380DCCE
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_44
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(42368..42844)
DNA (477bp) protein (159aa)
50S ribosomal protein L15 n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QSF1_SPILD
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_45
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(42938..43117)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=1 Tax=Spirosoma panaciterrae RepID=UPI00036701D0
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
SCNpilot_cont_300_bf_scaffold_101_curated_46
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(43137..43655)
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FB9A4
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_101_curated_47
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(43659..44012)
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Spirosoma panaciterrae RepID=UPI000362EB3E
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_48
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(44146..44703)
DNA (558bp) protein (186aa)
50S ribosomal protein L6 n=1 Tax=Spirosoma panaciterrae RepID=UPI000379CB5C
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_49
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(44717..45115)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C6C83
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_50
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(45207..45476)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003663964
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ribosomal protein S14
SCNpilot_cont_300_bf_scaffold_101_curated_51
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(45500..46054)
DNA (555bp) protein (185aa)
50S ribosomal protein L5 n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E0346
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_52
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(46075..46431)
DNA (357bp) protein (119aa)
50S ribosomal protein L24 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003818957
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_53
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(46435..46803)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Spirosoma RepID=UPI0003769F96
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_54
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(46807..47172)
DNA (366bp) protein (122aa)
30S ribosomal protein S17 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003618C85
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_55
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(47185..47379)
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Spirosoma panaciterrae RepID=UPI00038216F5
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_56
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(47400..47831)
DNA (432bp) protein (144aa)
50S ribosomal protein L16 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003672A03
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_101_curated_57
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(47937..48788)
DNA (852bp) protein (284aa)
30S ribosomal protein S3 n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D6834
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_58
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(48795..49187)
DNA (393bp) protein (131aa)
50S ribosomal protein L22 n=1 Tax=Spirosoma RepID=UPI000371D9C4
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_59
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(49254..49532)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Spirosoma panaciterrae RepID=UPI000381A213
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_60
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(49542..50366)
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003707EE1
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying items 31-60 of 286 in total

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