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SCNpilot_cont_300_bf_scaffold_101_curated

Search features with annotation key words

Displaying items 91-120 of 286 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_101_curated_91
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

84751..87207
DNA (2457bp) protein (819aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003676430
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADB36885.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_92
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

87253..87675
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000376BAB7
Contig34, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77458.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_101_curated_93
unknown

Not on your lists

87770..88036
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_101_curated_94
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(88101..92090)
DNA (3990bp) protein (1330aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000371D038
Superfamily I DNA and RNA helicase and helicase subunits-like protein
Superfamily I DNA and RNA helicase and helicase subunits-like protein {ECO:0000313|EMBL:ADB41722.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_95
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(92173..93366)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C56EC
propeptide PepSY amd peptidase M4
Propeptide PepSY amd peptidase M4 {ECO:0000313|EMBL:ADB41721.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_96
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(93456..95837)
DNA (2382bp) protein (794aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI000365EF29
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ADB41720.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_97
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(95999..97054)
DNA (1056bp) protein (352aa)
membrane protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000375DBD7
integral membrane protein TerC; K05794 tellurite resistance protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:ADB41719.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_98
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

97199..97939
DNA (741bp) protein (247aa)
glycosyl transferase family 2 n=1 Tax=Spirosoma panaciterrae RepID=UPI00037AC35B
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADB41718.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_99
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(98028..99428)
DNA (1401bp) protein (467aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
dihydrolipoyl dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E439E
SCNpilot_cont_300_bf_scaffold_101_curated_100
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

99882..100808
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036AC418
hypothetical protein; K02836 peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_101
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

100951..101634
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F7BCE
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT95825.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_300_bf_scaffold_101_curated_102
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

101675..102373
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000364182B
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ADB41713.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_103
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(102450..103148)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003710F55
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41712.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_104
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(103284..104180)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000365171A
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADB41711.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_105
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(104189..104812)
DNA (624bp) protein (208aa)
protease n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E934D
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ADB41710.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_106
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(104883..105854)
DNA (972bp) protein (324aa)
Dimethylallyltranstransferase (EC:2.5.1.1); K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Dimethylallyltranstransferase {ECO:0000313|EMBL:ADB41709.1}; EC=2.5.1.1 {ECO:0000313|EMBL:ADB41709.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
isoprenyl synthetase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D7048
SCNpilot_cont_300_bf_scaffold_101_curated_107
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(105919..106743)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037BDBC2
Uncharacterized protein {ECO:0000313|EMBL:AKD58791.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_101_curated_108
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(106811..107245)
DNA (435bp) protein (145aa)
cytosine deaminase (EC:3.5.4.1); K01485 cytosine deaminase [EC:3.5.4.1]
cytosine deaminase n=1 Tax=Spirosoma panaciterrae RepID=UPI000360C351
Cytosine deaminase {ECO:0000313|EMBL:AKD57743.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_101_curated_109
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(107322..108014)
DNA (693bp) protein (231aa)
NUDIX hydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI000362FB0A
NUDIX hydrolase {ECO:0000313|EMBL:AKD57744.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
NUDIX hydrolase
SCNpilot_cont_300_bf_scaffold_101_curated_110
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(108133..108786)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E7D57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41705.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_111
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(108892..109734)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003771FA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI50862.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_101_curated_112
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(109878..112061)
DNA (2184bp) protein (728aa)
peptidase S9 n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E1486
Peptidase S9 {ECO:0000313|EMBL:AKD57747.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
SCNpilot_cont_300_bf_scaffold_101_curated_113
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(112069..112590)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003720C8D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41703.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_114
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(112797..114935)
DNA (2139bp) protein (713aa)
peptidase S46 n=1 Tax=Spirosoma panaciterrae RepID=UPI000378C9D3
peptidase S46
Peptidase S46 {ECO:0000313|EMBL:ADB41702.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_115
unknown

Not on your lists

115219..115434
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_101_curated_116
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

115469..116296
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E5A06
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41700.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_117
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(116365..117705)
DNA (1341bp) protein (447aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3]
NADH dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI000381D5F3
NADH dehydrogenase {ECO:0000313|EMBL:AKD57752.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_101_curated_118
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

117927..120305
DNA (2379bp) protein (793aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B0E22
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADB41698.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_119
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

120305..121276
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037AEF17
Uncharacterized protein {ECO:0000313|EMBL:AKD57753.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_101_curated_120
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(121368..122471)
DNA (1104bp) protein (368aa)
DAHP synthetase I/KDSA; K04516 chorismate mutase [EC:5.4.99.5]
cytochrome C4 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003691576
DAHP synthetase I/KDSA {ECO:0000313|EMBL:ADB41696.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying items 91-120 of 286 in total

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