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SCNpilot_cont_300_bf_scaffold_101_curated_212

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 209111..209422

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F7A62 similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 103.0
  • Bit_score: 196
  • Evalue 1.30e-47
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 116.0
  • Bit_score: 134
  • Evalue 2.40e-29
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB41622.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 116.0
  • Bit_score: 134
  • Evalue 1.10e-28

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 312
ATGTACCAGGTAGCAGACACCATCAGCAACGACAACCGGGAGCTTTTAGCCACCGAAGAACCGCTTGCCCTGAGTGAGTATAGCTCAGTAGTTCGTGACGGATTACGCCAACTTTCCGTTCAACGTCGATTAGTATTTACCTTACGTTCAGAACAAGGCCTTTCCAATGAGGAGGTGGCCGAGAAGCTACAGATTCCGGTTAGTTTGGTAAAGACGCAATATTATAATGCCTGCCGGTTTCTGCGCGACTACCTGCGCCAGCACGCGGGTGTAAAAGCCATGCTGGTCGTTATGACTACCTTCTGTAACTAA
PROTEIN sequence
Length: 104
MYQVADTISNDNRELLATEEPLALSEYSSVVRDGLRQLSVQRRLVFTLRSEQGLSNEEVAEKLQIPVSLVKTQYYNACRFLRDYLRQHAGVKAMLVVMTTFCN*