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SCNpilot_cont_300_bf_scaffold_207_curated_3

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 1531..2514

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMP7_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 325.0
  • Bit_score: 295
  • Evalue 8.20e-77
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 325.0
  • Bit_score: 295
  • Evalue 2.60e-77
Transcriptional regulator {ECO:0000313|EMBL:AEI51280.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 325.0
  • Bit_score: 295
  • Evalue 1.10e-76

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 984
ATGCCCATTGTCAAAAAACGCGAGGAGCGTTTACATACCATCAATAGCCGCCTGAACCGCTGGGGTAACCGTCCGGCTACGACCGACGAACTCGCCCGTCTGTGCGCCGTGGCCGAATCGACTATCAAGCAGGACATAGCCTATCTCAAAGAGGTTCACTACGCCCCAATCGCCTACAGCCGTAAACCCAATGGCTATTACTACACGGAGCCGTTCAATCTGGCCGCGTCCATTACCTTTACGGAGAAAGACCTGACGGCGCTTCATGCGGCCGTGGCAACGCTCAACCAGTACCAGCACCTGCATCTGTTCGATGGTCTTCGCGGAACGGTCGATAAGATCGACAAAGCGGTTCGGTTTCGCACCAGCCCCTCCGACGATTTCGGCCGACACATCCTGTTCGAGTCGGTTCCGTTCGTCAAAGGAAGCACGTATGTAGAACTGTTTTTGCAGGCGATCCATGCCCAGCGGGTGGTGACGTTCGCGCATCAGCGATTCGATACGGAGATAACTAAAACCCATCGGCTATTTCCGTATGTCATTAAAGAACACCGGAACCGATGGTACGTGGTCGGCTGGCAACTGGATTATGGCGAAATCCGGGTTTTCGGCCTGGATCGCATCATCGACGGCACCCTCCAGATTACCGACGACACCTACGATGCTCCTCCGTTTGATGGCAACCTGTATTTTCATAAAGCACTGGGGGTTGCCGCTTACGATACCCCTCCCGAAGACGTGGTGCTATCCTTTACGCGGCAGCAGGGTTTGATTTTTCGGGCGCAACCCTTTTATCCGTTTCAGGAAGAAGATGTCCTGGTCGACAGCGAGCATGAACTTCGGGTGACCCTGTCGATTATCGTCAATAAAGAACTGGTTTACGAACTGGCCCGTCTGGGCAATTCGGTCAAAGTGATCTCCCCGCAACCCTTAGCTGATGACCTTATCGAATTTCATCGACAAGCCCTTGACCAATATCTGTAA
PROTEIN sequence
Length: 328
MPIVKKREERLHTINSRLNRWGNRPATTDELARLCAVAESTIKQDIAYLKEVHYAPIAYSRKPNGYYYTEPFNLAASITFTEKDLTALHAAVATLNQYQHLHLFDGLRGTVDKIDKAVRFRTSPSDDFGRHILFESVPFVKGSTYVELFLQAIHAQRVVTFAHQRFDTEITKTHRLFPYVIKEHRNRWYVVGWQLDYGEIRVFGLDRIIDGTLQITDDTYDAPPFDGNLYFHKALGVAAYDTPPEDVVLSFTRQQGLIFRAQPFYPFQEEDVLVDSEHELRVTLSIIVNKELVYELARLGNSVKVISPQPLADDLIEFHRQALDQYL*