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SCNpilot_cont_300_bf_scaffold_207_curated

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_207_curated_1
unknown

Not on your lists

comp(2..559)
DNA (558bp) protein (186aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_207_curated_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(556..1374)
DNA (819bp) protein (273aa)
CRISPR-associated protein Cas6 n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QHN8_SPILD
CRISPR-associated protein Cas6
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:ADB39837.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_207_curated_3
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1531..2514
DNA (984bp) protein (328aa)
Transcriptional regulator n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMP7_RUNSL
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEI51280.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_207_curated_4
unknown

Not on your lists

comp(2642..3091)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D08F4
SCNpilot_cont_300_bf_scaffold_207_curated_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3238..4353)
DNA (1116bp) protein (372aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
endo-1,4-beta-xylanase (EC:3.2.1.8); K01181 endo-1,4-beta-xylanase [EC:3.2.1.8]
Endo-1,4-beta-xylanase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QMX0_SPILD
SCNpilot_cont_300_bf_scaffold_207_curated_6
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4461..6398)
DNA (1938bp) protein (646aa)
esterase n=1 Tax=Spirosoma panaciterrae RepID=UPI000364A0CE
Putative esterase {ECO:0000313|EMBL:CCH51771.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
putative esterase
SCNpilot_cont_300_bf_scaffold_207_curated_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6498..7616)
DNA (1119bp) protein (373aa)
esterase n=1 Tax=Spirosoma panaciterrae RepID=UPI000379C87A
Putative esterase {ECO:0000313|EMBL:CCH51768.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
esterase
SCNpilot_cont_300_bf_scaffold_207_curated_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7814..8893)
DNA (1080bp) protein (360aa)
esterase n=1 Tax=Spirosoma panaciterrae RepID=UPI000365B3F3
Putative esterase {ECO:0000313|EMBL:CCH51767.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
esterase
SCNpilot_cont_300_bf_scaffold_207_curated_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8909..10069)
DNA (1161bp) protein (387aa)
esterase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E7807
Putative esterase {ECO:0000313|EMBL:CCH51766.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
putative esterase
SCNpilot_cont_300_bf_scaffold_207_curated_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10223..11794)
DNA (1572bp) protein (524aa)
carboxylesterase type b; K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
Carboxylic ester hydrolase; EC=3.1.1.-;; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
carboxylesterase n=1 Tax=Spirosoma panaciterrae RepID=UPI000377CBCE
SCNpilot_cont_300_bf_scaffold_207_curated_11
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11905..13995)
DNA (2091bp) protein (697aa)
coagulation factor 5/8 type domain-containing protein; K01206 alpha-L-fucosidase [EC:3.2.1.51]
Coagulation factor 5/8 type domain protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GCZ0_9BACT
Coagulation factor 5/8 type domain protein {ECO:0000313|EMBL:CCH51764.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_300_bf_scaffold_207_curated_12
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14066..14986)
DNA (921bp) protein (307aa)
endo-1,4-beta-xylanase n=1 Tax=Spirosoma panaciterrae RepID=UPI000371FBA7
Esterase/lipase {ECO:0000313|EMBL:CCH51762.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
esterase/lipase
SCNpilot_cont_300_bf_scaffold_207_curated_13
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15113..15964)
DNA (852bp) protein (284aa)
acetylxylan esterase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B9943
Uncharacterized protein {ECO:0000313|EMBL:CCH51761.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_207_curated_14
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15965..17530)
DNA (1566bp) protein (522aa)
glycoside hydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003824A22
Glycoside hydrolase family 43 {ECO:0000313|EMBL:CCH51759.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
glycoside hydrolase family protein
SCNpilot_cont_300_bf_scaffold_207_curated_15
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17565..18107)
DNA (543bp) protein (181aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K898_9BACT
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CCH00351.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_207_curated_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18194..20413)
DNA (2220bp) protein (740aa)
acetyl-CoA carboxylase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037DD72A
Acetyl-CoA carboxylase {ECO:0000313|EMBL:AKD53826.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein; K09955 hypothetical protein
SCNpilot_cont_300_bf_scaffold_207_curated_17
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20606..22345)
DNA (1740bp) protein (580aa)
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:CCH51756.1}; EC=3.2.1.37 {ECO:0000313|EMBL:CCH51756.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
xylan 1,4-beta-xylosidase (EC:3.2.1.37); K01198 xylan 1,4-beta-xylosidase [EC:3.2.1.37]; K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55]
xylan 1,4-beta-xylosidase n=1 Tax=Spirosoma panaciterrae RepID=UPI000363F75C
SCNpilot_cont_300_bf_scaffold_207_curated_18
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22406..24880)
DNA (2475bp) protein (825aa)
Alpha-L-fucosidase {ECO:0000313|EMBL:CCH00354.1}; EC=3.2.1.51 {ECO:0000313|EMBL:CCH00354.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
alpha-L-fucosidase (EC:3.2.1.51)
alpha-L-fucosidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D6FEB
SCNpilot_cont_300_bf_scaffold_207_curated_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25170..26984)
DNA (1815bp) protein (605aa)
carbohydrate-binding protein SusD n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E6908
RagB/SusD domain protein {ECO:0000313|EMBL:ADB37474.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
RagB/SusD domain-containing protein
SCNpilot_cont_300_bf_scaffold_207_curated_20
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26999..30460)
DNA (3462bp) protein (1154aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A16E4
TonB-dependent receptor plug {ECO:0000313|EMBL:ADB37475.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
TonB-dependent receptor plug
SCNpilot_cont_300_bf_scaffold_207_curated_21
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30698..31771)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003643444
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:CCH51751.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
anti-FecI sigma factor FecR
SCNpilot_cont_300_bf_scaffold_207_curated_22
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31912..32502)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000373DA2E
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH51750.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_cont_300_bf_scaffold_207_curated_23
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32549..33643)
DNA (1095bp) protein (365aa)
endo-1,4-beta-xylanase (EC:3.2.1.8); K01181 endo-1,4-beta-xylanase [EC:3.2.1.8]
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
endo-1,4-beta-xylanase n=1 Tax=Spirosoma panaciterrae RepID=UPI00038027EA
SCNpilot_cont_300_bf_scaffold_207_curated_24
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

34258..34995
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000371CE32
IclR family transcriptional regulator {ECO:0000313|EMBL:CCH56003.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
IclR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_207_curated_25
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35192..38188
DNA (2997bp) protein (999aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI000361F324
TonB-dependent receptor plug {ECO:0000313|EMBL:AEI51981.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
TonB-dependent receptor plug
SCNpilot_cont_300_bf_scaffold_207_curated_26
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

38217..39722
DNA (1506bp) protein (502aa)
carbohydrate-binding protein SusD n=1 Tax=Spirosoma panaciterrae RepID=UPI000377BC9C
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEI51980.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_207_curated_27
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

39906..41282
DNA (1377bp) protein (459aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036F1FE5
glycoside hydrolase family 10
SCNpilot_cont_300_bf_scaffold_207_curated_28
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

41397..42737
DNA (1341bp) protein (447aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003671AD7
glycoside hydrolase family 10
SCNpilot_cont_300_bf_scaffold_207_curated_29
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

42758..43987
DNA (1230bp) protein (410aa)
Glucarate dehydratase {ECO:0000313|EMBL:CCH55998.1}; EC=4.2.1.40 {ECO:0000313|EMBL:CCH55998.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
glucarate dehydratase (EC:4.2.1.40); K01706 glucarate dehydratase [EC:4.2.1.40]
glucarate dehydratase n=1 Tax=Spirosoma panaciterrae RepID=UPI000382D070
SCNpilot_cont_300_bf_scaffold_207_curated_30
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

44079..44858
DNA (780bp) protein (260aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEI51975.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEI51975.1};; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000376BD04
Displaying items 1-30 of 78 in total

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