ggKbase home page

SCNpilot_cont_300_bf_scaffold_207_curated_22

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(31912..32502)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000373DA2E similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 196.0
  • Bit_score: 355
  • Evalue 3.10e-95
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH51750.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 188.0
  • Bit_score: 292
  • Evalue 5.80e-76
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 192.0
  • Bit_score: 291
  • Evalue 2.20e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGACTCTTCAGGACCAGGCGTTATGGCAGTTATATCGTGATGGCGATAAGCAGGCATTGGGCCAACTGGCCGAGCGGTATTATCGTGCGCTGAAGCACTATGGGTTAAAATTTATGGTCGATGAGTTGGTTGTAGAGGATTGTATTCAGGACCTCTTTTTGCAGCTCTGGCAAAACCGACTCCAGATCAATGCGACAGAATCTGTCAAGCATTATCTATTCAAAGCCTTACGCCATCATGTGCTTCAATACCTGCGGTCGCAAAAACGGGCTTTTGTTGACGAGTTGGACTGGGATAGTTCTGTGGCAGAAGAGACGGATTCAGAAACGTTATTGATTCAACGGGAATCATTAACCAGTTTAACAAACACGATACAGGAGCTACTGGCTTCGTTGCCAGCTCGCGAACGGGAGGCTCTTTACTTACGCTACTACGAGAATCTGTCCATACCCGAAATCGCTGAGGTGATGAACGTAAATCGTCAATCGGTATCCAATTTTCTGCAAAAAGCTATTCATAAACTTCGAAGCAGGTGGCTTTCGCCAGTCTTCTTGGCCTTCTGTGTTTTGGTAAACAGACTCTTTTTCTAG
PROTEIN sequence
Length: 197
MTLQDQALWQLYRDGDKQALGQLAERYYRALKHYGLKFMVDELVVEDCIQDLFLQLWQNRLQINATESVKHYLFKALRHHVLQYLRSQKRAFVDELDWDSSVAEETDSETLLIQRESLTSLTNTIQELLASLPAREREALYLRYYENLSIPEIAEVMNVNRQSVSNFLQKAIHKLRSRWLSPVFLAFCVLVNRLFF*