ggKbase home page

SCNpilot_cont_300_bf_scaffold_38_curated_22

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(21582..22691)

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD n=1 Tax=Spirosoma panaciterrae RepID=UPI00036417EF similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 369.0
  • Bit_score: 695
  • Evalue 4.00e-197
Secretion protein HlyD {ECO:0000313|EMBL:AKD56217.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 369.0
  • Bit_score: 642
  • Evalue 4.30e-181
secretion protein HlyD; K03543 multidrug resistance protein A similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 369.0
  • Bit_score: 639
  • Evalue 8.20e-181

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1110
ATGGATAAGAAAACGTTATTTCGAGTAGGTGGGGTCATCGTTCTGGCTATTGCCCTCTTTTTTGGGTACAGCGAGTTTCGCTACCTGCAACGTCACGAAACGACCGACGATGCTCAGGTTGATGGGGATGTGAACCCAGTTATTCCGAAAGCGAGTGGGTATGTGAAAGAAATTCGCTTTAAGGATAACCAGCCTGTAAAAGAAGGCGATACCTTGTTTGTACTGGACGATGCCGATTATCGTATCCGGCTAGAGCAGGCCGAAGCCGCGCTGCAAAGTTCCCTGGCAGCTGCCGGAGTGTCGCGTTCGCAGGTAGCTGTTGCATCGGCCACCATCCAGAGTTCGGAAGCCAGTGTCCAAACGGCACGCAATCAGGTAGCAACGGCACAGGCTAACGTAACCGCAGCACAGGCACGGGCTCGTAAAGCCAATCAGGATTTTGAACGGTATAGCCGATTGCTGGCCGAAAAGACGGTTCCCCAACAACAATTTGATGCGGTTCAGGCCGAACGTGATGCGGCTCAGGCGCAATTGCAGGCGGCTCAGGCTCAGCTACAAACAGCTCAGTCGCAGGTGGCGGCTGCGGGTACGCAAACAGGGGTGACCAGTTCGCAACGACGGGCGACGGAAGGACAGATCACGGTGGCTCAGGCGGCTATCAAGCAACGTCAGGCCGATTTGGAAATGGCGAAACTGCAACTGTCTTATACCGTGATTAAAGCCCCGGTTTCGGGTGTGGTATCGAAGCGGTCGGTGCAGATCGGTCAGTTAGTGCAGGCTGGACAAGCCGTTTGCTCGGTAGTGGGCAACTCAAATCTGTGGGTAACGGCCAATTTCAAAGAAACACAGTTGAAGCAAATGCAGCCCGGCCAGACGGTCGATATTGATGTCGATGCCTTCGGTGGTGAAAAGCTGGTAGGCCACGTGGGTTCGTTTGCCGGAGCTACGGGCGCCAAATTCTCGCTTCTTCCTCCCGACAATGCGACAGGCAACTATGTGAAAGTGGTACAGCGGATTCCGGTTCGGATCGAGCTGGAGAAGAACAGCCCTTTATACGCCAAAATCCGTCCGGGAATGAGCGTAACCGTTGCGGTCGATCTGCAGAAATAA
PROTEIN sequence
Length: 370
MDKKTLFRVGGVIVLAIALFFGYSEFRYLQRHETTDDAQVDGDVNPVIPKASGYVKEIRFKDNQPVKEGDTLFVLDDADYRIRLEQAEAALQSSLAAAGVSRSQVAVASATIQSSEASVQTARNQVATAQANVTAAQARARKANQDFERYSRLLAEKTVPQQQFDAVQAERDAAQAQLQAAQAQLQTAQSQVAAAGTQTGVTSSQRRATEGQITVAQAAIKQRQADLEMAKLQLSYTVIKAPVSGVVSKRSVQIGQLVQAGQAVCSVVGNSNLWVTANFKETQLKQMQPGQTVDIDVDAFGGEKLVGHVGSFAGATGAKFSLLPPDNATGNYVKVVQRIPVRIELEKNSPLYAKIRPGMSVTVAVDLQK*