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SCNpilot_cont_300_bf_scaffold_58_curated_17

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(16629..17756)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI00037B3DC5 similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 375.0
  • Bit_score: 697
  • Evalue 8.20e-198
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 377.0
  • Bit_score: 558
  • Evalue 1.40e-156
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADB36322.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 377.0
  • Bit_score: 558
  • Evalue 6.40e-156

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1128
ATGCACCGTCGAATCTCAGTCCGTAATTTGTTTGTCCTAGCTGGGGGCTTGTTGCTGGCCAGTTTGTTTGCCCAATGCCATTCGTCTGAAAGTAAAGCCGAAAAAGAAGAAGAGGAAAGCGATTCGGTTGCGGCACCAGCGCCCACCGAAGTATTCGCCTTAACCAAAGGTAAACTGGCTTCGTCGCTAAACATTCCCGGTGAACTGATCGCGTACCGGGATGTGGATATTTATGCTAAAGTGAGCGGGTTTATTAAAACGCTCAATGCCGATGTGGGTTCTGAAGTGCGCGAAGGGCAGTTGCTGGCACAGGCCGAAGCGCCTGAACTGAGTGCACAACTGGCCTCTGCCGACTCGAAGCTCAAAGCTCAGGAAGCTCTTTCGATTGCCAGCAAAGCCAATTACGAACGGGTACTGGAAGCCAGCAAGTTTTCTGGAGCCGTATCGAAAAATGATGTCGATCAGGCACTGGCCAAACGGAATGCCGACCTGGCTCAACTGGAGGCCGCTAAATCTGCCTATCGGGAAGTGGCGACTCTCAAAAACTACCTGGCTATCCGGGCTCCGTTCGATGGGATTATCAGCGCACGTAATGCCAGTACAGGGGCTTACATTGGCCCTGCCGGTAAAGGGTCGGAGTTTCCGCTGTTTGTGCTGACCGAGCAGAAACGCCTTCGTCTGGTCGTGGCTGTGCCTGAAGCTTATACGGGCTATGTACATGAAGGAAGCGAGGTGAGCTTTACGGTCAAAACGTTTCCGAACCGCACATTTACGGGGAAAATCAAACGGCTATCGGGCGCGTTGGACAAGCGGCTGCGCTCGGAGCGGGTAGAGGTCGATGTGATCAACAGCGACAAAAAGCTCTTGCCTGGTATGGTTGCCGAAGTGACGCTCCCCCTGCCTACGCAGAGCAATACGTTTATCGTTCCGAAAGCCGCGCTGGTCAACTCCACAACGGGTGTCTTTGTGATTCGGGTAAAGGATGGAAAATCGGAGTGGGTTTCGGTTAAGAAAGGACTTGAGGCCGACAATAAAATTGAAATCTTCGGTGATCTGAACGAAGGCGATCAACTCGTTTCGACCGCCAGCGAGGAGATTCGCGATGGCGCACCAGTGAATGTGAAGTAG
PROTEIN sequence
Length: 376
MHRRISVRNLFVLAGGLLLASLFAQCHSSESKAEKEEEESDSVAAPAPTEVFALTKGKLASSLNIPGELIAYRDVDIYAKVSGFIKTLNADVGSEVREGQLLAQAEAPELSAQLASADSKLKAQEALSIASKANYERVLEASKFSGAVSKNDVDQALAKRNADLAQLEAAKSAYREVATLKNYLAIRAPFDGIISARNASTGAYIGPAGKGSEFPLFVLTEQKRLRLVVAVPEAYTGYVHEGSEVSFTVKTFPNRTFTGKIKRLSGALDKRLRSERVEVDVINSDKKLLPGMVAEVTLPLPTQSNTFIVPKAALVNSTTGVFVIRVKDGKSEWVSVKKGLEADNKIEIFGDLNEGDQLVSTASEEIRDGAPVNVK*