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SCNpilot_cont_300_bf_scaffold_58_curated

Search features with annotation key words

Displaying items 1-30 of 420 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_58_curated_1
unknown

Not on your lists

comp(3..161)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_58_curated_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

473..2920
DNA (2448bp) protein (816aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
DNA mismatch repair protein MutS n=1 Tax=Spirosoma panaciterrae RepID=UPI000373DEF8
Smr protein/MutS2; K07456 DNA mismatch repair protein MutS2
SCNpilot_cont_300_bf_scaffold_58_curated_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3025..3687
DNA (663bp) protein (221aa)
haloacid dehalogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI000367DC6C
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ADB36332.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_58_curated_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3842..4624
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368A89E
Uncharacterized protein {ECO:0000313|EMBL:AKD54311.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_58_curated_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4593..5099)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000363E080
Molybdenum cofactor sulfurase {ECO:0000313|EMBL:AKD54307.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
MOSC domain-containing protein
SCNpilot_cont_300_bf_scaffold_58_curated_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5260..7971)
DNA (2712bp) protein (904aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000360383A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36328.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_58_curated_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8126..9499
DNA (1374bp) protein (458aa)
Xaa-Pro aminopeptidase n=1 Tax=Spirosoma panaciterrae RepID=UPI000377867C
Xaa-Pro aminopeptidase
Xaa-Pro aminopeptidase family enzyme {ECO:0000313|EMBL:ADB36327.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_58_curated_8
unknown

Not on your lists

9641..9766
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_58_curated_9
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

9759..10241
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9E5N5_9FLAO
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_cont_300_bf_scaffold_58_curated_10
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10516..11418
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZJG5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EHM49884.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacterium valvarum F0432.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_58_curated_11
unknown

Not on your lists

11409..11555
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_58_curated_12
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11600..12181
DNA (582bp) protein (194aa)
cyclic nucleotide-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000360664B
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:AEI50191.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_58_curated_13
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12262..12882
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000365BBE9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI50190.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_58_curated_14
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13069..13692
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037FA9A6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI50188.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_58_curated_15
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13843..15123
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D02B7
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AFK03419.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_cont_300_bf_scaffold_58_curated_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15160..16470
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000366F6D9
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AEW02689.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_300_bf_scaffold_58_curated_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16629..17756)
DNA (1128bp) protein (376aa)
RND transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI00037B3DC5
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADB36322.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_58_curated_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17811..21113)
DNA (3303bp) protein (1101aa)
acriflavin resistance protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D3A26
Acriflavin resistance protein {ECO:0000313|EMBL:ADB36321.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
acriflavin resistance protein
SCNpilot_cont_300_bf_scaffold_58_curated_19
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21851..22465
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003653845
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACU04925.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_300_bf_scaffold_58_curated_20
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22616..23923
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003731FFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI49163.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_58_curated_21
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(24037..25134)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C984D
peptidase, S9A/B/C family, catalytic domain protein
Tax=RBG_13_Ignavibacteria_36_8_curated
SCNpilot_cont_300_bf_scaffold_58_curated_22
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25168..26484)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FCB22
Peptidase U62 modulator of DNA gyrase {ECO:0000313|EMBL:CCH51430.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
peptidase U62 modulator of DNA gyrase
SCNpilot_cont_300_bf_scaffold_58_curated_23
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26597..28240)
DNA (1644bp) protein (548aa)
modulator protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000367194E
Uncharacterized protein {ECO:0000313|EMBL:CCH51429.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
peptidase U62 modulator of DNA gyrase
SCNpilot_cont_300_bf_scaffold_58_curated_24
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28245..30446)
DNA (2202bp) protein (734aa)
glutaryl-7-aminocephalosporanic-acid acylase (EC:3.5.1.93)
Glutaryl-7-aminocephalosporanic-acid acylase {ECO:0000313|EMBL:AEI46587.1}; EC=3.5.1.93 {ECO:0000313|EMBL:AEI46587.1};; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000362CE5B
SCNpilot_cont_300_bf_scaffold_58_curated_25
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30565..32088)
DNA (1524bp) protein (508aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000365CE98
Uncharacterized protein {ECO:0000313|EMBL:CCH52684.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_58_curated_26
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32088..35429)
DNA (3342bp) protein (1114aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000375B898
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH52685.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
SCNpilot_cont_300_bf_scaffold_58_curated_27
unknown

Not on your lists

comp(35538..35786)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037BC17E
SCNpilot_cont_300_bf_scaffold_58_curated_28
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36324..37403)
DNA (1080bp) protein (360aa)
fructose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
fructose-bisphosphate aldolase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003776082
Fructose-bisphosphate aldolase, class II {ECO:0000313|EMBL:ADB36319.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_58_curated_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37547..39988)
DNA (2442bp) protein (814aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003674903
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37947.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_58_curated_30
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(40182..40586)
DNA (405bp) protein (135aa)
glyoxalase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A33C2
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADB38770.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying items 1-30 of 420 in total

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