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SCNpilot_cont_300_bf_scaffold_58_curated_19

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 21851..22465

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003653845 similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 204.0
  • Bit_score: 398
  • Evalue 4.30e-108
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 190.0
  • Bit_score: 213
  • Evalue 8.00e-53
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACU04925.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 190.0
  • Bit_score: 213
  • Evalue 3.60e-52

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 615
ATGACGTTTCCTAATGAGAACTTTTTACTAAACCGTATGTCGACAGGTGATGAAAAAGCATTCCGTAAACTGTACGATTTTTACCGGCCCGATCTGTATCGCTTCGTGTTTAAGTTCATCAAATCCAATGAGCTGTCGAACGACATATGCCAGGAAGTATTCATGAAAATCTGGGAAGACCGCTGGGCCATACAGGAAGTCAGTTCATTTAAATCGTACCTATTTACTATTACAAAAAATCACACCTTCAACATGCTGAAACGTGCGGCTGTTGAAGATCGGATCAAGGGGGAAGTTTTACGGAATTACACCGTCTCCAAAAACGATACGGAAGAAAGTCTGCAAGCCAGGGAATATCAGCAGTTTTTGCAGCGGGTGCTGGACACTTTACCCCCGCAGAGTCGGGAAGTTTTCAAACTATGTCGGCAGCAGGAAAAGAGCTATGACGAAGCTGCACAGATTTTAGGCATATCGAGTAGTGCGATCAAAAAGCACATGGTTCGGTCGATGAAAGTGCTCAAGTTTGCGGTCGAAAAAGATATGGGGATCGCCTTCAGTGTTTTTATGCAACTGCTGGCGCAATCGGGCGATTGGCTGCCTGTGTTTGAAGCCTGA
PROTEIN sequence
Length: 205
MTFPNENFLLNRMSTGDEKAFRKLYDFYRPDLYRFVFKFIKSNELSNDICQEVFMKIWEDRWAIQEVSSFKSYLFTITKNHTFNMLKRAAVEDRIKGEVLRNYTVSKNDTEESLQAREYQQFLQRVLDTLPPQSREVFKLCRQQEKSYDEAAQILGISSSAIKKHMVRSMKVLKFAVEKDMGIAFSVFMQLLAQSGDWLPVFEA*