ggKbase home page

SCNpilot_cont_300_bf_scaffold_58_curated_31

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 40828..41613

Top 3 Functional Annotations

Value Algorithm Source
xylose isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CAF0F similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 261.0
  • Bit_score: 518
  • Evalue 3.60e-144
xylose isomerase similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 258.0
  • Bit_score: 445
  • Evalue 1.60e-122
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADB36318.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 258.0
  • Bit_score: 445
  • Evalue 7.20e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 786
ATGTGGGGCATGGAAAATCTATCGTATTCAGAAGCTGCCAAACGGGTGAAAGCCGCAGGATACGACGGCATGGAAATTGCGGCTGGCCCCGGCAAACGAAAAGAAGCCACACAGGTCATGCGCGATCACGGTCTCGAACCGATTTTGATGGGCTTCGGTGGAGGGAGTAATTTTGCCGAGCACAAGAAAAAATACCACGATGATCTGCTCGACATTGCTTCGTACAAACCGCTGTTCATCAACGTCCATACGGGCCACGATTATTTCACCTTCGAGCAAAACGTTGAACTGATTCAGGCAGCCGCCGATGTACAGAAACAAACCGGCGTTCGGATTCTGCACGAAACGCATCGGGGCCGTTTTTCGTACAGCGCACCCGCCATTCAGTACTACTTACTCAAACTACCCGATCTGCGACTCACCGCCGATTATTCGCACTGGGTCAACGTGGCGGAGTCGTATCTGGCCGATCAGGCGGATAATGTGGCACGCGCCATTGCCGTCAGCGACCACATTCACTGCCGGGTAGGCCAGCCCGAAGCCCCACAGGTTACTGACCCCAGGGCACCTGAATGGAACGATGCGCTCGAAACACACGCCAAATGGTGGGATGCCATTCGTGACCGACTCCAGCGGGCCAATGCCTCACAACTCACCGTTACCTGCGAATTTGGCCCAGCCCCGGGTTATCTGCCTACGCTACCCTATAGCAACTTGCCCGTTGCGAGTCAGTGGGACATCAATGTCTTCATGAAAGACTTCCTGAAAAAGCGTTGGCAGGTATAA
PROTEIN sequence
Length: 262
MWGMENLSYSEAAKRVKAAGYDGMEIAAGPGKRKEATQVMRDHGLEPILMGFGGGSNFAEHKKKYHDDLLDIASYKPLFINVHTGHDYFTFEQNVELIQAAADVQKQTGVRILHETHRGRFSYSAPAIQYYLLKLPDLRLTADYSHWVNVAESYLADQADNVARAIAVSDHIHCRVGQPEAPQVTDPRAPEWNDALETHAKWWDAIRDRLQRANASQLTVTCEFGPAPGYLPTLPYSNLPVASQWDINVFMKDFLKKRWQV*