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SCNpilot_cont_300_bf_scaffold_1_curated_15

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(29800..31806)

Top 3 Functional Annotations

Value Algorithm Source
xylan 1,4-beta-xylosidase (EC:3.2.1.37); K05349 beta-glucosidase [EC:3.2.1.21] similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 663.0
  • Bit_score: 1040
  • Evalue 0.0
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:AEI46931.1}; EC=3.2.1.37 {ECO:0000313|EMBL:AEI46931.1};; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 663.0
  • Bit_score: 1040
  • Evalue 0.0
glycoside hydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI000381686A similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 668.0
  • Bit_score: 1260
  • Evalue 0.0

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2007
ATGAAATACCTATCGCTCCGTATAATTACCGGCATTCTCTTTACGACCTGTGCGGTTGCCCAGAACCCCAGGCAGCCCATGCTGGGTAAGCGCAGTGTGGCATTACTGAATAGTAACGCGTTGCAATTCAAGGATCTTAACAAAAACGGTAAGCTTGATCCATACGAAGACTGGCGATTGCCGGTAGAAAAACGGGTGAATGACCTGGTGTCGCAGATGACGCTGGAAGAGAAGATTGGGTTCATGCTCATCAGTACTACACGGATGGCGGGCGACTACTCGTTTCAGCAAAATGCGCCAAAGGCCGAAATCAGTAGCGGATTCAATGAAGAAGACCTGGTGCAGCCCAACAATATGTTTACCCGTAAGCCTTTGCCAGTGCCCATGTTGTCGGCGGCTGGTACTACGAAAGGGGTAACCCAATTTCACCTGCGTCATTTCATTCTGCGGGCAAATCCGTCGGCCCGCACTATAGCCGAGTGGTCGAACAACTTACAGGCACTATGTGAAGGTACACGACTGGGAATTCCGGCCATTGTGGCCTCTAATCCCAGAAATCATGTGACCATCGATGCCTCAATTGGGTTGAGTGTGGGCACGACGGCTTTTTCGAAGTGGCCGGGTGAGCTTGGTCTTGCCGCCATGCGTGATCCGAAATTAACCCGCGAATTTGCGCAGACTGCGGCTCAGGAATGGGCCTCTGTCGGCCTTCGGAAAGGGTATATGTACATGGCTGATCTGGCTACCGAACCCCGCTGGCAGCGCGTCGAAGGTACGTTTGGCGAAGATGCCGACCTGGCCGCCAGTATGATTCGGGAAATCGTGCTGGGCTTTCAGGGGGCTTCCCTCAATCCATCGTCGGTTGCCATGACAACCAAGCATTTTCCGGGTGGAGGGCCTCAGGTAGATGGCCAGGATTCGCATTTCGACTGGGGGAAGTTTGCCCATTATCCAGGCGGTATGTTCGACTATCACGTAAAGCCTTTTAAAGCCGCGATCGACGCTGGTACGTCGGCCATAATGCCTTATTATTCAGCGCCGAAAGGTAAGGGTTTTGAGGAGGTTGGCTTCTCATACAACAAGGCCATCATACAGGATTTACTCCGGAAAAAGCTGGGTTTCAAGGGTATTGTCAATTCTGATACAGGGCCCATCGATATGATGCCCTGGGGGGTCGAAAACCTGACGTTACAGCAACGATACCAAAAAGCGCTGGATGCCGGCGTCGATATTTTTTCGGGAACGGCCGACCCGACCGTACTACTTGAAACGGCCAGAAAAGGCCTGGTTTCCGAAGCCCGAATCAATGAATCGGTTAGCCGCTTATTGCGTGAAAAATTCCTGCTGGGATTGTTTGAAAACCCCTATGTCGATGTCGACAAAGCCGCACAACTGGTTGGTAGCGAAACATTGCAGAAAAAGGCCGATCTGGCGCATCGTAAGTCGATTGTGCTGCTACAAAATGACGCAAAACAGTTGCCTATACAGGCCAAAACGAAGGTTTATTTTGAAACGTATTATGATAACGGTCGGGGAGGTAATGCGGTGCATATCCATAAGCCAGCCCAGTCGAATAGTAATCTTGAATTTGTGTCGTCGAAAGACGAGGCCGATGTGGTGCTGCTTTGGTTGATTCCTACAGGTGGAAGTTTGTTTACTGCAGCTGGGAAACCCATTGAGCTACGTTTATCGAAAAACCATGTCGATGTGAACCATGTCAATGAGCTATTGAAAAGTAAACCGACTGTTCTGGCGATCAATTTTTCGAGCCCGTGGGTACTGGATGAACTGGATGCATCGGCTACGAAAACTGTATTGGCCACCTTCGGCACTACACCCGATGCCCTGCTGGATGTTGTCCGGGGAGTCTATAAACCAACGGGCAAATTGCCGTTTACGATTCCGGCTTCTGAAAAAGCGGTTGCCGAAAACAAGTCTGACGTTCCTGGTTTTCAGGAAGGTAGTGACTATGCCCGGTTTCGATTTGGTCATGGCTTAAGCTATTAG
PROTEIN sequence
Length: 669
MKYLSLRIITGILFTTCAVAQNPRQPMLGKRSVALLNSNALQFKDLNKNGKLDPYEDWRLPVEKRVNDLVSQMTLEEKIGFMLISTTRMAGDYSFQQNAPKAEISSGFNEEDLVQPNNMFTRKPLPVPMLSAAGTTKGVTQFHLRHFILRANPSARTIAEWSNNLQALCEGTRLGIPAIVASNPRNHVTIDASIGLSVGTTAFSKWPGELGLAAMRDPKLTREFAQTAAQEWASVGLRKGYMYMADLATEPRWQRVEGTFGEDADLAASMIREIVLGFQGASLNPSSVAMTTKHFPGGGPQVDGQDSHFDWGKFAHYPGGMFDYHVKPFKAAIDAGTSAIMPYYSAPKGKGFEEVGFSYNKAIIQDLLRKKLGFKGIVNSDTGPIDMMPWGVENLTLQQRYQKALDAGVDIFSGTADPTVLLETARKGLVSEARINESVSRLLREKFLLGLFENPYVDVDKAAQLVGSETLQKKADLAHRKSIVLLQNDAKQLPIQAKTKVYFETYYDNGRGGNAVHIHKPAQSNSNLEFVSSKDEADVVLLWLIPTGGSLFTAAGKPIELRLSKNHVDVNHVNELLKSKPTVLAINFSSPWVLDELDASATKTVLATFGTTPDALLDVVRGVYKPTGKLPFTIPASEKAVAENKSDVPGFQEGSDYARFRFGHGLSY*