ggKbase home page

SCNpilot_cont_300_bf_scaffold_1_curated_23

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(37346..38110)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037EF1B2 similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 254.0
  • Bit_score: 473
  • Evalue 1.70e-130
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 258.0
  • Bit_score: 321
  • Evalue 3.40e-85
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AEI49891.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 258.0
  • Bit_score: 321
  • Evalue 1.50e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 765
ATGAATGTATTGATTGTTGAAGACGAACCACTTACAGCCCAACGGCTGGAAATTCTTTTACTGGAGTATGACCCTCAGATTCAGGTGCTGGCTCAACTGCCGTCGGTGTCGAAAGCAGTCCAGTGGTTCAACGATCCTCTGTCCACCGAACCGGAGTTGATTTTTCTGGATATTCACCTGGAAGATGATTTAGGGTTCAACCTCATCAAAAAATTAAATTTGACGATCCCGATCATCTTCACCACCGCCTTTGACGAATACGCGTTACAGGCCTTCAAGGCAAATAGTATTGATTATCTGTTAAAGCCCATTGAAACGGATGAACTGGCTGCGGCTATTGATAAGTTTAAAATGGTTCGCCAGGCATCCGCAACGATGAATACGGCCGTGCTCAATCAGTTGATCAAAAAGCTGGAGCCGCCTACTTATCGCGATCGGTTTATGGTAAGTGTAGGGCCCCGATTGCGGAGCATTCGGATTGAGGAAATTGCCTATTTCTTTTTTGAAGAGAAAGCTACGTATGTTATGCCGCATACGGGTGTGCCGGTGTCGATCGACTATAGTCTGGATAAGCTGGGTCAACTGGTTGATCCCGATCAGTTTTTTCGCGTCAATCGATCGTATCTGGTTAGTGCGTCGGGTATCCGTTCGGTGTATGCGTACTCGGGTAGTAAACTGAAGGTAGAATTGGCCCCACAGCCCCGGCAGGAGGTATTTGTCAGTATTGATCGGGTAACGAGTTTTAAAGAATGGATGGGTAAATGA
PROTEIN sequence
Length: 255
MNVLIVEDEPLTAQRLEILLLEYDPQIQVLAQLPSVSKAVQWFNDPLSTEPELIFLDIHLEDDLGFNLIKKLNLTIPIIFTTAFDEYALQAFKANSIDYLLKPIETDELAAAIDKFKMVRQASATMNTAVLNQLIKKLEPPTYRDRFMVSVGPRLRSIRIEEIAYFFFEEKATYVMPHTGVPVSIDYSLDKLGQLVDPDQFFRVNRSYLVSASGIRSVYAYSGSKLKVELAPQPRQEVFVSIDRVTSFKEWMGK*