ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_300_bf_scaffold_1_curated_26

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(40100..42154)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003821AF9 similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 675.0
  • Bit_score: 1279
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 682.0
  • Bit_score: 947
  • Evalue 2.00e-273
Uncharacterized protein {ECO:0000313|EMBL:ACU62778.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 682.0
  • Bit_score: 947
  • Evalue 8.90e-273

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2055
ATGAAACGGACTACCCCAATTGAGTCGATTCGGAATGTTGCAGCTTCGTTGCTGATGCTGTCCGCGAATCTATCATTTGCCCAGTCGGCAAGCCATCCCCTTCGCATTATTCATCCCTTAAGCCTGGAACAGGTTCGGGTCAGTGACCAGTTCTGGAGTCCAAAACTAAAGGTCTGGGATTCGAAAACGGTGTACGATGTATTCGACAAGCTGGAAGGCAAATACGAACCGGACCGAAAAGACCTGATCGACGAAAAGGCGAAGCTGGGCCGGACCCGGAATGCCTTTTTAAATTTCGATTGGGTAGCTCAGGGAAAGAAAAATACAGGTGAACACGATGGCCCGCCCTGGTACGATGGGCTGGTTTATGAAACCATTCGCGGAGCCGCCGATTTGCTGGTTGAATACCCCGATCCTAAGCTGGAACAGAAAATAGACGGCTACATTGATCGCATTGCGGCTGCGCAGGCGGCTGACCCCGACGGGTATCTTAACACCTACACAACGTTGGTAAAACCTACTCAACGATGGGGGACCAACGGGGGCGACGATAAATGGCAGCACGATATTTACAATGCCGGAATGCTCATCGAAGCGGCTGTTCATTATTACAAAGCAACCGGCAAAACGAAGCTGCTGGATGTAGCCACCAAGTTCAGTAATTATATCTACCAGCAAATTGGTCCGGCTCCCAAAGCAAACGTCATTCCCGGGCATGGAGGCCCCGAGGAGGCTATTCTGAAGTTGTATTGGTTGTTTCGGGATGAACCGGCGCTGAAGGCAAAAATGAGCGTTCCGGTCGATGAGAACCACTACTATACCATGGCTCGGTTCTGGATCGAAAACAGAGGCAATTATGGTGAGAAAGATGGCAGTCATGCCCGCAAGAGCGACGAGTCATACAATCAGGACCACATGTCGGTTTTTACCCAGAAAACCATCGAAGGACATGCCGTGCGAGCTACCTTACTGGCAACGGGGGTGGCGGCAACGGCTTTGGAAAATAAGGATGATCGGTATGTTGAAACGGCCAACAATTATTGGGACAATATGATTGGCAAGCGGATGTTCATTACCGGGGGCGAGGGAGCCATAGCTGATGGCGAACGATTTGGGGCCAATCATTTCCTGCCCGAATCGGCCTATCTGGAATCCTGTGCGGCCATAGGGTCAGCCTTTTTTAGCCAGCGGATGAATCAACTGGAGGCCGACGGAAAATACATCGATGAACTGGAACGGGTGCTGTATAACAATCTGCTGTCCAGTGTATCGCTCGATGGGAGCCATTATTTTTACGAGAATCCACTGGTGGCCACCGATCATAAACGCTGGGCATGGCATAGTTGTCCCTGTTGCCCACCTATGCTTCTGAAAATGGTATCGGCCATGCCTGGGTTTATCTATGCATACGACAACGATGCCGTTTATGTAAACCTGTTTATCGGTAGCGACGCAACAATCAACCAGAAGGGTAATGCGATCCGCATTCGACAGATGACCCAGTATCCTTGGAAAGGCGAATCGATCATTGAAGTCGACCCCGCGTCGAGTAAGGCATTTACTGTGAATGTACGCATCCCCGGTTGGGCGCATAGTGTCGAAAACCCATTCGGCCTATACCACTCGAAGGTGAGCGAACCAATTGTACTCAAAGTGAACGGCAAAGCCATACCCGTGAACCCAAAAAATGGGTACGCTGCTATTCACAGAACCTGGAAAAAAGGTGATCGGATCGAACTGAGTCTACCTATGCAGCCCAGAGTCATTACACCAAATGATTCGATACAGACCATTAACGGGAAAGTCGCCCTGGCGTCGGGCCCTATTATTTATGGATTTGAAGGCGTCGACAATGCTGCACTAAGCGAGTATATGCTCTCTGCCAATACACCGCTCAAACTGACCTACAAGCCTGATCTGTTAAATGGCGTTAATGTTATTACGGGAGAAGCGATGGATAAATCGGCGAAAGCGGTATCGTTTACGGCGGTTCCGTTTTACACATTCGGGAACCGGGGTGTTTATCCATATCGAGTCTGGTTGCCGAAACAATAG
PROTEIN sequence
Length: 685
MKRTTPIESIRNVAASLLMLSANLSFAQSASHPLRIIHPLSLEQVRVSDQFWSPKLKVWDSKTVYDVFDKLEGKYEPDRKDLIDEKAKLGRTRNAFLNFDWVAQGKKNTGEHDGPPWYDGLVYETIRGAADLLVEYPDPKLEQKIDGYIDRIAAAQAADPDGYLNTYTTLVKPTQRWGTNGGDDKWQHDIYNAGMLIEAAVHYYKATGKTKLLDVATKFSNYIYQQIGPAPKANVIPGHGGPEEAILKLYWLFRDEPALKAKMSVPVDENHYYTMARFWIENRGNYGEKDGSHARKSDESYNQDHMSVFTQKTIEGHAVRATLLATGVAATALENKDDRYVETANNYWDNMIGKRMFITGGEGAIADGERFGANHFLPESAYLESCAAIGSAFFSQRMNQLEADGKYIDELERVLYNNLLSSVSLDGSHYFYENPLVATDHKRWAWHSCPCCPPMLLKMVSAMPGFIYAYDNDAVYVNLFIGSDATINQKGNAIRIRQMTQYPWKGESIIEVDPASSKAFTVNVRIPGWAHSVENPFGLYHSKVSEPIVLKVNGKAIPVNPKNGYAAIHRTWKKGDRIELSLPMQPRVITPNDSIQTINGKVALASGPIIYGFEGVDNAALSEYMLSANTPLKLTYKPDLLNGVNVITGEAMDKSAKAVSFTAVPFYTFGNRGVYPYRVWLPKQ*