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SCNpilot_cont_300_bf_scaffold_377_curated_1

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 2..301

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A0789 similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 91.0
  • Bit_score: 177
  • Evalue 7.60e-42
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 90.0
  • Bit_score: 119
  • Evalue 4.50e-25
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEI51226.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 90.0
  • Bit_score: 119
  • Evalue 2.00e-24

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 300
ATTAGAGCTTGTTTTGTTCATAGGAATCGCCGTTATCAGGAATACCTCATTTTGCACGAATTACATCAGGCCGAGCTGACCGACGAAACCGTGCAGTTTGCCGATTTATCGAAAGCGGTAGAGGAAGTCATGAAAAAACTACCCGAAAAAACCTGCGAGGTATTTAAGTTGAGTCGTTTCGAGAATCAACCCGTGAAAAGTATTGCCCGGCAACTCAACCTGTCGGAAAAGGCGGTCGAATACCATATCACCAAGTCGCTCAAAGTACTACAGGAGCAACTTCGAATTTATCAGAACTGA
PROTEIN sequence
Length: 100
IRACFVHRNRRYQEYLILHELHQAELTDETVQFADLSKAVEEVMKKLPEKTCEVFKLSRFENQPVKSIARQLNLSEKAVEYHITKSLKVLQEQLRIYQN*