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SCNpilot_cont_300_bf_scaffold_377_curated_26

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 27998..29494

Top 3 Functional Annotations

Value Algorithm Source
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 498.0
  • Bit_score: 909
  • Evalue 2.00e-261
arabinose isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A0289 similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 495.0
  • Bit_score: 984
  • Evalue 3.40e-284
L-fucose isomerase-like protein similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 498.0
  • Bit_score: 909
  • Evalue 4.40e-262

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1497
ATGAAAAATCCATCTCCAAATGGTTTGGCAGTGCAGCAAGCAGAATGGGTAAAACGTAAGAAAACACGCCCTCGCATTGGGGTTTTCGGCGTAGGTTATTTCAAATACTGGGGGCAGTTCGAGGGCTTGCTAGACGACATGATGCAAAAACAGGCCGTTTTCATCAGCAAGATTGAAGCGCTCGATACAGCCGAAATCATTGATTTGGGGCTCGTTGATGATGCAACGAAAGCGTATGAAATGGTTCCGAAACTTCAGGCGGCCAATCTGGACCTTATCTTCTGCGATATGCTCACTTACGCCACCTCGAGTACGTTTGGCGTCATCATCAAAAGCATCGACGTTCCGATTGTTCTGGTAGCCCTTCAGCCTGATAAGGCGATGGATTATAGCCGTGCCTCCACGTACATGCAGTTGTACAACGACGACATCTGTTCACTACCGGAGTTTGCGGGCGTAGCCGTTCGGATGGGTAAGAAAGTGCCCCAGATGATCATCGGAACCCTGCACGACGACCCGGCTGCCGATGCCGACATTGAAGAATATTGCCGCATTGCTGCCGTATTGCATGACCTGAAAACGGCGCGGATCGGCCATATCGGTCACCCGATTGAGGCCATGCTCGATATGCACTCCGATTCGACCATGCTTACGGCGCATTTTGGGGCACATATCGTCCAGTGCGAAGCGCATGAGATCGTTTCGCAATACCAGAAAGCCACAGAGCCCGAAATTGACGCCATTAAAGAGCGAATTCTGGCCTATTTTGACACCCCCGACCCTGTTTCGGACCCCATTTCTGAAAAACTACGCGACTCCGATCTGCACATTGCGGCCCAGGCTGCCGTAGCCCTGGAAAAATTCATCAAAGCTAAAAAACTGGATGGGCTGGCCTATTACTACGATGGCCCGGAGGGAAGCGACACCCGCGTCGTGATGTCAAACCTGATTGTCGGCAACTCGCTGTTACAAGGTGCAGGTTTTCCGATGTGTGGCGAATCGGACCTGAAAACCTGCATTGCCATGCTCATCATGGAACGATTGGGTATTGGCGGCAGCTTCGCAGAGTTTCACCCGGTCGATTTCAAGGAGGATTTCGTCCTGGTCGGGCACGACGGGCCGCATAACATCGCCATTGCCGAAGGTCAGCCGGTATTGCGCAGTCTGAAAAAATACCATGGCAAACCCGGTTTTGGCGCTGGTGTAGAATTCAAGATCAAGGAAGGGCCGATTACTATGCTCAGCATCAGTTCGACCTACGAAGGCAAAATGAAGTTCGTGATTGCCGAAGGCGAGTCGATCGCCGGGCCGATTCCCCCAACGGGCAATACCAATACGCGCGGCTTTTTCAAACCCAACGTTCGCACCTTCCTGAAACGCTGGATTAGCGAAGGCCCAACGCACCACTTCGCGCTGGGTGTTGGGCACCATGCCAAGACCATCCAGAAAATTGCCGACTACCTCAAAGTCGAATCAGTCATTATTTCTAATGAATAA
PROTEIN sequence
Length: 499
MKNPSPNGLAVQQAEWVKRKKTRPRIGVFGVGYFKYWGQFEGLLDDMMQKQAVFISKIEALDTAEIIDLGLVDDATKAYEMVPKLQAANLDLIFCDMLTYATSSTFGVIIKSIDVPIVLVALQPDKAMDYSRASTYMQLYNDDICSLPEFAGVAVRMGKKVPQMIIGTLHDDPAADADIEEYCRIAAVLHDLKTARIGHIGHPIEAMLDMHSDSTMLTAHFGAHIVQCEAHEIVSQYQKATEPEIDAIKERILAYFDTPDPVSDPISEKLRDSDLHIAAQAAVALEKFIKAKKLDGLAYYYDGPEGSDTRVVMSNLIVGNSLLQGAGFPMCGESDLKTCIAMLIMERLGIGGSFAEFHPVDFKEDFVLVGHDGPHNIAIAEGQPVLRSLKKYHGKPGFGAGVEFKIKEGPITMLSISSTYEGKMKFVIAEGESIAGPIPPTGNTNTRGFFKPNVRTFLKRWISEGPTHHFALGVGHHAKTIQKIADYLKVESVIISNE*