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SCNpilot_cont_300_bf_scaffold_360_curated_56

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 73156..73659

Top 3 Functional Annotations

Value Algorithm Source
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=29730 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.;" source="Gossypium raimondii (New World cotton).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 173.0
  • Bit_score: 212
  • Evalue 3.80e-52
similar to Mal s 6 allergen; K09565 peptidyl-prolyl isomerase F (cyclophilin D) [EC:5.2.1.8] similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 164.0
  • Bit_score: 210
  • Evalue 3.30e-52
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) RepID=S7RLJ3_GLOTA similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 163.0
  • Bit_score: 212
  • Evalue 3.60e-52

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Taxonomy

Gossypium raimondii → Gossypium → Malvales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 504
ATGAATTCAAACGTCTTTTTTGACATTAAGGTAGGGAATGCCCAAAATACCATCCGTTTCGTAATTGAACTTTATGATGATGTCGTACCCCGTACGGCAGCTAACTTTCGGGCACTATGCACTGGCCAAAATGGCTTTGGTTACAAAGGCAGCCCTTTCCACCGAATCATTCCTGCATTCATGATGCAGGGGGGAGACATTACAAAAGGGAATGGAACTGGGGGCCGCTCCATTTACGGCGCTAAATTTGAAGATGAAAATTTTCAACTAAAACATAGCGGGCCAGGTATTGTCAGTATGGCTAACGCGGGTACAAATACAAATAGCTCACAATTTTTTATCACCTTCGGTAGAGCACCCCACCTGGATGGCAAGCATGTTGTATTTGGCAAAGTGCTTGACAATTATATTAGTAATCTCAACTACATTGAGCCATTTGGTAGTTCTTTTGGCAAACCTCTACAAAGCGTCATCATTACTGACTGTGGACTGATCGCTGAATAG
PROTEIN sequence
Length: 168
MNSNVFFDIKVGNAQNTIRFVIELYDDVVPRTAANFRALCTGQNGFGYKGSPFHRIIPAFMMQGGDITKGNGTGGRSIYGAKFEDENFQLKHSGPGIVSMANAGTNTNSSQFFITFGRAPHLDGKHVVFGKVLDNYISNLNYIEPFGSSFGKPLQSVIITDCGLIAE*