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SCNpilot_cont_300_bf_scaffold_360_curated

Search features with annotation key words

Displaying items 31-60 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_360_curated_31
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36508..37560
DNA (1053bp) protein (351aa)
radical SAM protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000375F5A7
Radical SAM protein {ECO:0000313|EMBL:AKD55718.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
radical SAM domain-containing protein
SCNpilot_cont_300_bf_scaffold_360_curated_32
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37662..38096)
DNA (435bp) protein (145aa)
DoxX family protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FA346
DoxX family protein {ECO:0000313|EMBL:AKD55715.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
DoxX family protein
SCNpilot_cont_300_bf_scaffold_360_curated_33
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(38245..38628)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QFI2_SPILD
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AKD55714.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein; K09959 hypothetical protein
SCNpilot_cont_300_bf_scaffold_360_curated_34
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

38846..39556
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003764AB7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38352.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_35
unknown

Not on your lists

comp(39563..39889)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_360_curated_36
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(39999..41489)
DNA (1491bp) protein (497aa)
glutamate synthase NADH/NADPH small subunit; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F1030
Glutamate synthase, NADH/NADPH, small subunit {ECO:0000313|EMBL:ADB38341.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_37
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(41502..46103)
DNA (4602bp) protein (1534aa)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:ADB38340.1}; EC=1.4.7.1 {ECO:0000313|EMBL:ADB38340.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
glutamate synthase (EC:1.4.7.1); K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
glutamate synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003728780
SCNpilot_cont_300_bf_scaffold_360_curated_38
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(46723..47592)
DNA (870bp) protein (290aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15]
dihydropteroate synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A0AA6
Dihydropteroate synthase {ECO:0000313|EMBL:AKD55707.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_360_curated_39
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

47696..48250
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000378DFE4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38337.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_40
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

48283..49425
DNA (1143bp) protein (381aa)
DoxX family protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035ECA9A
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AKD58505.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_360_curated_41
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

49557..50039
DNA (483bp) protein (161aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
shikimate kinase n=1 Tax=Spirosoma panaciterrae RepID=UPI000377B850
SCNpilot_cont_300_bf_scaffold_360_curated_42
unknown

Not on your lists

comp(50041..50169)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_360_curated_43
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

50277..54374
DNA (4098bp) protein (1366aa)
Hybrid signal transduction histidine kinase D {ECO:0000313|EMBL:CCH53101.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCH53101.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E641E
histidine kinase
SCNpilot_cont_300_bf_scaffold_360_curated_44
unknown

Not on your lists

comp(57840..58211)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_360_curated_45
unknown

Not on your lists

comp(58941..59093)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_360_curated_46
unknown

Not on your lists

comp(60021..60425)
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_360_curated_47
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

60799..61671
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D8A57
Uncharacterized protein {ECO:0000313|EMBL:AKD54568.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_360_curated_48
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(61773..63344)
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036376F8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38333.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_49
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(63607..64890)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037EE3E4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38332.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_50
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


65176..66645
DNA (1470bp) protein (490aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15]
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
prolyl-tRNA synthetase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003640973
SCNpilot_cont_300_bf_scaffold_360_curated_51
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

66978..67949
DNA (972bp) protein (324aa)
xylose isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI000368D13C
Xylose isomerase {ECO:0000313|EMBL:AKD56320.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
xylose isomerase
SCNpilot_cont_300_bf_scaffold_360_curated_52
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

67961..70861
DNA (2901bp) protein (967aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036985EE
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ADB36399.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_53
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

71065..71517
DNA (453bp) protein (151aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
peptidylprolyl isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI000371D478
FKBP-type peptidylprolyl isomerase
SCNpilot_cont_300_bf_scaffold_360_curated_54
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(71590..72006)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003666871
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38327.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_55
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

72157..73044
DNA (888bp) protein (296aa)
UV-endonuclease UvdE; K13281 UV DNA damage endonuclease [EC:3.-.-.-]
UV-endonuclease UvdE n=1 Tax=Spirosoma panaciterrae RepID=UPI0003804646
UV-endonuclease UvdE {ECO:0000313|EMBL:ADB38326.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_56
Gossypium raimondii, Gossypium, Malvales, rosids, Streptophyta, Viridiplantae

Not on your lists

73156..73659
DNA (504bp) protein (168aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=29730 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.;" source="Gossypium raimondii (New World cotton).;"
similar to Mal s 6 allergen; K09565 peptidyl-prolyl isomerase F (cyclophilin D) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) RepID=S7RLJ3_GLOTA
SCNpilot_cont_300_bf_scaffold_360_curated_57
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(73744..74316)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035FEA82
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH01235.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_360_curated_58
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(74703..75308)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035EA6FF
Uncharacterized protein {ECO:0000313|EMBL:AKD55695.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_360_curated_59
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

75716..76051
DNA (336bp) protein (112aa)
Lactate 2-monooxygenase (EC:1.13.12.4)
Lactate 2-monooxygenase {ECO:0000313|EMBL:AEI51296.1}; EC=1.13.12.4 {ECO:0000313|EMBL:AEI51296.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A7E77
SCNpilot_cont_300_bf_scaffold_360_curated_60
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

76214..77023
DNA (810bp) protein (270aa)
glucose-1-dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI000372F895
Sugar dehydrogenase {ECO:0000313|EMBL:AKD55694.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
short-chain dehydrogenase/reductase SDR
Displaying items 31-60 of 92 in total

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