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SCNpilot_cont_300_bf_scaffold_360_curated

Search features with annotation key words

Displaying items 61-90 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_360_curated_61
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

77122..79773
DNA (2652bp) protein (884aa)
glucosidase n=1 Tax=Spirosoma panaciterrae RepID=UPI000376F011
Glucosidase {ECO:0000313|EMBL:AKD55693.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_360_curated_62
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

79798..80076
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372D1FF
hypothetical protein; K07401 selenoprotein W-related protein
Uncharacterized protein {ECO:0000313|EMBL:ADY53958.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_cont_300_bf_scaffold_360_curated_63
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(80172..80720)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F1BA5
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ADB36932.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_64
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(80800..81672)
DNA (873bp) protein (291aa)
pimeloyl-CoA dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003818287
pirin; K06911
Pirin domain protein {ECO:0000313|EMBL:ADB36933.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_65
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

81824..82180
DNA (357bp) protein (119aa)
HxlR family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI00037CA6F6
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADB36934.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_66
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(82200..82514)
DNA (315bp) protein (105aa)
beta-lactamase n=1 Tax=Spirosoma panaciterrae RepID=UPI000362D9F4
hypothetical protein
Beta-lactamase {ECO:0000313|EMBL:AKD53836.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_360_curated_67
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(82511..83833)
DNA (1323bp) protein (441aa)
ABC transporter substrate-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C4049
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKD53837.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_360_curated_68
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(83950..85245)
DNA (1296bp) protein (432aa)
citrate transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI0003689B3F
Citrate/H+ symporter, CitMHS family {ECO:0000313|EMBL:CCH51362.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
citrate/H+ symporter, CitMHS family
SCNpilot_cont_300_bf_scaffold_360_curated_69
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

85383..87089
DNA (1707bp) protein (569aa)
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:AKD55214.1}; EC=4.2.1.9 {ECO:0000313|EMBL:AKD55214.1};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
dihydroxy-acid dehydratase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037DAE83
SCNpilot_cont_300_bf_scaffold_360_curated_70
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

87385..88743
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000377E00B
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase-like protein {ECO:0000313|EMBL:ADB37875.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_71
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

88820..89596
DNA (777bp) protein (259aa)
short-chain dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E5DB3
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB37876.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_72
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(89694..90614)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CDEC4
Uncharacterized protein {ECO:0000313|EMBL:AKD55216.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_360_curated_73
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(90802..92262)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037ABF11
hypothetical protein
Leucine-rich repeat-containing protein typical subtype {ECO:0000313|EMBL:ADB37878.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_74
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(92419..95262)
DNA (2844bp) protein (948aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-]
pseudouridine synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003821DAB
Pseudouridine synthase {ECO:0000313|EMBL:AKD55801.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_360_curated_75
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(95567..96355)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003612382
LytTR family transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADB37881.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_76
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(96437..97471)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000380CD45
Histidine kinase {ECO:0000313|EMBL:AKD55799.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
signal transduction histidine kinase LytS
SCNpilot_cont_300_bf_scaffold_360_curated_77
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(97452..98144)
DNA (693bp) protein (231aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
ATP-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037B1A3D
SCNpilot_cont_300_bf_scaffold_360_curated_78
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(98240..99490)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035CE779
ABC-type transport system {ECO:0000313|EMBL:AKD55797.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein; K09808 lipoprotein-releasing system permease protein
SCNpilot_cont_300_bf_scaffold_360_curated_79
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(99562..100620)
DNA (1059bp) protein (353aa)
RND transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI000368A7CF
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADB37885.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_80
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(100698..102014)
DNA (1317bp) protein (439aa)
membrane protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B131A
hypothetical protein
Outer membrane protein-like protein {ECO:0000313|EMBL:ADB37886.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_360_curated_81
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(102174..103337)
DNA (1164bp) protein (388aa)
Cytochrome c peroxidase {ECO:0000313|EMBL:CCH53717.1}; EC=1.11.1.5 {ECO:0000313|EMBL:CCH53717.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ccpA2; di-heme cytochrome c peroxidase (EC:1.11.1.5); K00428 cytochrome c peroxidase [EC:1.11.1.5]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000378E2AE
SCNpilot_cont_300_bf_scaffold_360_curated_82
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103823..104221
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E69D9
Uncharacterized protein {ECO:0000313|EMBL:EGP09622.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_360_curated_83
unknown

Not on your lists

104222..105172
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000361C148
hypothetical protein
SCNpilot_cont_300_bf_scaffold_360_curated_84
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105213..106310)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368B6C1
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
SCNpilot_cont_300_bf_scaffold_360_curated_85
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(106313..107872)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000366B78B
Uncharacterized protein {ECO:0000313|EMBL:EGN30502.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC-type multidrug transport system, ATPase and permease component; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_cont_300_bf_scaffold_360_curated_86
unknown

Not on your lists

comp(107869..109143)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035CF3BD
SCNpilot_cont_300_bf_scaffold_360_curated_87
Geminocystis sp. NIES-3709, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(109140..109766)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003668A19
Glycosyl transferase {ECO:0000313|EMBL:BAQ65148.1}; TaxID=1617448 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3709.;"
family 2 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_360_curated_88
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(109772..110830)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C15EB
HlpA protein {ECO:0000313|EMBL:BAQ60052.1}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3708.;"
methyltransferase FkbM
SCNpilot_cont_300_bf_scaffold_360_curated_89
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(111051..111236)
DNA (186bp) protein (62aa)
CsbD family protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000375C902
CsbD family protein
CsbD family protein {ECO:0000313|EMBL:CCH54990.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_300_bf_scaffold_360_curated_90
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(111359..112552)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003772E42
flavin-containing monooxygenase FMO
Flavin-containing monooxygenase FMO {ECO:0000313|EMBL:ADB37897.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying items 61-90 of 92 in total

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