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SCNpilot_cont_300_bf_scaffold_360_curated_79

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(99562..100620)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI000368A7CF similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 352.0
  • Bit_score: 662
  • Evalue 2.10e-187
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 352.0
  • Bit_score: 597
  • Evalue 2.00e-168
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADB37885.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 352.0
  • Bit_score: 597
  • Evalue 8.90e-168

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1059
ATGCTTACCGCCTGCAAAAACGGTACAGATGGCCTCTCTCCCACCTATCGGGATTTGACCGAAGCGGTGTATGCATCGGGCAATATTTACCCCCGCAACGAATACACTGTTACGGCCGATGCGGCTGGAATTTTACAGAAACGGCTCGTCAATGAAGGCGATTCCATTCAGCAGAACCAACTCCTGTTTGTGCTGGAAAGCGCTACGGAAGATGCGCGTCAGCAGGCAGCCGCCAACGCGTACCGACAGGCACGGGCTAATCTGGGGCCTGGTTCGCCCGTACTGGCTGAACTGGAAGCTCAGGTACGAAATGCCCGCACCCGACTGGCCAATGATTCGATTAACTACAACCGGTTTCGGGAATTGTACGGCCAGAATGCCACCTCGAAAGCAGAACTCGAACGGGCTGAGCTAAACTATACCCTCTCGAAGAATAATCTTCGCGCCCAGCTCAACACACTACAGCGCAGCCGCGATCAAATTCAACTCGATGTGGCCAACAACCGCAGTCAGTTGGTTTCGTCGGAAGAAGCCGGGCGGAACACCCGTATTCGCAGTCTGCTGAATGGTAAAGTGTATGAAGTGTACAAAGATCCGGGTGAGGTTGTTCGGGTGGGCGACCAGTTGGCGCTGGTTGGTAGCGGCAATCACCTGTATGCGCAATTGGCTGTCGATGAAAGTGATTTTGGGCGGATGCGTATCGGCCAGGAGGTTGTTCTGAAGGCAGATGTGTACCCCGATAAAGTATTTAAAGCGCATGTCAGCAAGATTTATCCCAAGCTGAACCGCAGCGACCAGTCATTCCGAGTCGATGCAGAGTTCGTGGGTGAACGTCCTGATGCCTACTATGGCCTCACCCTCGAAGCGAACATCATCATCAGCCAGAACAAGCATGTACTGACTATTCCTAAGTCATATGTGTTCGGCACCGATAGCGTCTGGGTCAATCAGGATGGGAAAAAGCAAAAAATCAAGTTCCAGAAAGGAGCCGAAAACTTCGATCTGGTCGAGGTGAAAGGTGGCCTGACAGAGACTTCTAAACTAATTGCGAATGAGTAA
PROTEIN sequence
Length: 353
MLTACKNGTDGLSPTYRDLTEAVYASGNIYPRNEYTVTADAAGILQKRLVNEGDSIQQNQLLFVLESATEDARQQAAANAYRQARANLGPGSPVLAELEAQVRNARTRLANDSINYNRFRELYGQNATSKAELERAELNYTLSKNNLRAQLNTLQRSRDQIQLDVANNRSQLVSSEEAGRNTRIRSLLNGKVYEVYKDPGEVVRVGDQLALVGSGNHLYAQLAVDESDFGRMRIGQEVVLKADVYPDKVFKAHVSKIYPKLNRSDQSFRVDAEFVGERPDAYYGLTLEANIIISQNKHVLTIPKSYVFGTDSVWVNQDGKKQKIKFQKGAENFDLVEVKGGLTETSKLIANE*