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SCNpilot_cont_300_bf_scaffold_95_curated_10

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(14825..18178)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 999.99
  • Bit_score: 2086
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 999.99
  • Bit_score: 2070
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Spirosoma panaciterrae RepID=UPI0003601968 similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 999.99
  • Bit_score: 2146
  • Evalue 0.0

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3354
TTGAAACCCGACGAATTACTCGGTCTATATACCGACGATAGTTTCATAAAGTTGCTGGCCGAGCCGCTCAGCCACAAGAAAACCGACGAGCCTCAGCGCCTTCAAATCAAAGGTCTGGCAGGAAGTCTGGACGCTGTTTTAGCCTCAGCCATTTATAAATCAGTTGGTGGAAATCATCTGTTTATTTCAACCGACCGCGATGAGGCAGCCTACTTTTTCAACGACCTTCAACATCTGCTCAGCCGCGATGTATTGCTGTTTCCAATGTCGTATAAAAAGCCTTATCAGTATGAGGAAATTGAGAATGCCAACGTACTGATGCGGGCAGAAGTGTTGAACAAACTAAATCCTGCTCCAAAAGAAGGCATCGTGTTAGTCACGTATCCAGAAGCCTTGTCGGAAAAGGTTATCAACAAACGCTCACTGCAAGCCAATACGTTAACGATTCGGGTAGGGGAGAAACTGGATACTCACTTCGTTGCTGAGCTTCTTCAGACGTATGAATTTGAAAAAACGGATTTTGTCTATGAAGCGGGACAGTTTTCAGTCCGTGGTGGAATCATCGACGTATTCTCGTTTGCCAGTGAATACCCATATCGAATCGATCTGTTCGATGATGAGGTAGAAAGCATACGGAAATTCAATCCAGAATCTCAACTTTCAACCGATCCGGTTGACTTTATTAACATTATCCCGAACATTCAGACCAAGTTAATTGAAGAAACACGGGAGCCATTTTTCGATTTTCTACCGCCTGACACAACGATCTGGGCCAAAGATGTTGAGTTTACACTTGAGATTATTGAGAGTTGCTACGAAAAAGCAGAGCAAAGTTTTGCTTCGGTTGTAGCAGGAAGTGGTGGTATTCAGGTTGTATCGGACCCGAATGAATTGTTTGAAACCCGCCGATCGTTTCTGAATGAGTTGAAACGCTTTCGAACAGTTGAGTTTGGCCGTAAATTTTATTTCAAAACCGACGGTCGACAACAATACACGTCGAAACCCCAGCCCTCATTTAATAAAGATTTCAAACGCCTGATCGACACCCTGGCCGACAATCAGGCAAAAGGATTTACTAATGTAATTGCCGCTGAGTCATTCAAACAGTTGGACCGCTTGCGAACAATCTTTGAGGAACTCGACCCTTTCGTGAAGTTTCAACCTATGAATATTGGGTTGCGAGAGGGTTATATCGATGATGTTCTGAAAATTGCCTGCTTCACCGATCACCAGATATTTGATCGATATTATAAATACAAGGTTCAAGATAAATTCTCGAAATCAAAAGCGCTTACATTACGCGAGTTAAAAACCCTGCAGCCTGGTGATTATGTTACCCATGTCGATCATGGTATAGGTCGGTTTGCGGGTTTAGAAAAAGTGGATCACGCTGGTAATGAGCAGGAAGCCATCCGGTTAATTTATCGAGACAATGATATCCTACTGGTCAGTATCCACAGCTTACATAAAATAGCGAAGTATAGTGGCCGGGAAGGTGGTCCACCCGTGATGAGTAAGTTGGGGTCGCAGGAGTGGGAACAGAAAAAGTCGCGAATTCGGAAACAAGTCAAAGACATTGCCCGTGAGCTAATCGCCCTATATGCCAAACGTAGAACGGCACCTGGGTATGCCTACAGCCGGGATAGTTTCTTACAAGCAGAGCTTGAATCATCGTTTCTTTATGAGGATACACCCGATCAGGCAAAAGCAACCAACGATGTAAAAGACGATATGGAACGGCCACACCCAATGGATCGATTGATTTGCGGGGATGTAGGTTTCGGAAAAACCGAAGTAGCCATCCGTGCGGCATTTAAGGCCGTATCCGATAATAAACAGGTTGCTGTGCTGGTCCCAACCACGATTCTGGCTATGCAACACTTCAAAACATTTTCGGAGCGAATGGCCGATTTCCCTGTCAAGATCGATTATATCAATCGGTTCCGGTCTGCTGGCCAGGTAAAAGAAATTGTAAAAGGAGTAGCCTCAGGCGAAATTGGAATTCTGATCGGTACGCACCGGATCGTTAATAAAGATATCAAATTCAAGGACTTAGGCTTATTAATTATCGACGAGGAGCAGAAATTCGGGGTAAAAACCAAAGATCGGTTGAAAGAAATGCGGGTTGAGGTCGATGTATTAACCTTAACGGCAACACCGATACCAAGGACGCTTCATTTCTCATTAATGGGCGCTCGTGATTTATCGGTCATTGCAACCCCTCCACCAAATCGCCAGCCAGTTACAACAGAAGTACATCCTTATAATGAAACGGTTATACGTGACGCCGTGAGTTACGAAATTCGACGGGGGGGACAGGTTTTCTTTGTTCACAACCGAGTGAGTGACATCGAATCCATCGGAAATCTGATCATGCGGCTGGTGCCCGAAGCACGTATTGGTGTGGCTCATGGTCAAATGGATGGCGACCGTCTGGAGCGCATCATGACTCGGTTTATCGAAGGCGATTACGATGTGCTGGTATCAACGAATATCATCGAATCAGGACTGGATATTCCGAACGCTAATACCATTCTGATCAACAATGCCCATTATTTTGGTTTGTCTGATTTGCACCAGATGCGGGGTAGGGTAGGGCGATCGAACCGAAAAGCGTTCTGCTATCTGCTAACCCCGCCACCGTCTGTTCTCACGGCCGATGCCCGTAAACGGCTCCAAACACTAGAAGATTTTTCAGATTTGGGCGAAGGATTTAAAATAGCCATGCGCGATCTTGATATTCGGGGTGCCGGTAACTTGCTGGGCGCTGAACAAAGTGGGTTTATCAATGATCTTGGCTTCGAAATGTATCACAAGGTTCTTGACGAAGCCGTTCAGGAACTCCGTGAGAATGAGTTTAAAGACTTGTTTGAAACGAAGCCCGGCGATCTTAAACTCTCTTTGCCGGATACCGTTATTGAGACGGATTTACAGGTGGTTATTCCAGAGCGATACGTCTCCAATATATCGGAACGGCTGGCGTTATATACCCGATTGGATAGCCTACAAAATGATGAAGAACTTCAGGCCTTCCGGCAAGAAATTATCGACCGGTTCGGTCCAATGCCAGAGGAAGTTAAGAATCTGATCAAAATGGTCAATGTTCGCTGGAAAGCAGAGCAATTATACCTTGAAAAACTGACGATTAAGAATAATATCCTGAAAGGGTACTTCGTTTCTAACGGGAATGATGACTTCTTCCGATCCGACCAATTTGGCAAGGTAATTGAGTACATAAAGCGAAACCCTACCAAATGCTCGCTTAAGGAGTCAAAAGGAAGGCCGATTTTTACCCATACTGATGTATTCTCAGTAGAGCAGTTGGATGAAATTTTAGGCGCAATGACCAATTAA
PROTEIN sequence
Length: 1118
LKPDELLGLYTDDSFIKLLAEPLSHKKTDEPQRLQIKGLAGSLDAVLASAIYKSVGGNHLFISTDRDEAAYFFNDLQHLLSRDVLLFPMSYKKPYQYEEIENANVLMRAEVLNKLNPAPKEGIVLVTYPEALSEKVINKRSLQANTLTIRVGEKLDTHFVAELLQTYEFEKTDFVYEAGQFSVRGGIIDVFSFASEYPYRIDLFDDEVESIRKFNPESQLSTDPVDFINIIPNIQTKLIEETREPFFDFLPPDTTIWAKDVEFTLEIIESCYEKAEQSFASVVAGSGGIQVVSDPNELFETRRSFLNELKRFRTVEFGRKFYFKTDGRQQYTSKPQPSFNKDFKRLIDTLADNQAKGFTNVIAAESFKQLDRLRTIFEELDPFVKFQPMNIGLREGYIDDVLKIACFTDHQIFDRYYKYKVQDKFSKSKALTLRELKTLQPGDYVTHVDHGIGRFAGLEKVDHAGNEQEAIRLIYRDNDILLVSIHSLHKIAKYSGREGGPPVMSKLGSQEWEQKKSRIRKQVKDIARELIALYAKRRTAPGYAYSRDSFLQAELESSFLYEDTPDQAKATNDVKDDMERPHPMDRLICGDVGFGKTEVAIRAAFKAVSDNKQVAVLVPTTILAMQHFKTFSERMADFPVKIDYINRFRSAGQVKEIVKGVASGEIGILIGTHRIVNKDIKFKDLGLLIIDEEQKFGVKTKDRLKEMRVEVDVLTLTATPIPRTLHFSLMGARDLSVIATPPPNRQPVTTEVHPYNETVIRDAVSYEIRRGGQVFFVHNRVSDIESIGNLIMRLVPEARIGVAHGQMDGDRLERIMTRFIEGDYDVLVSTNIIESGLDIPNANTILINNAHYFGLSDLHQMRGRVGRSNRKAFCYLLTPPPSVLTADARKRLQTLEDFSDLGEGFKIAMRDLDIRGAGNLLGAEQSGFINDLGFEMYHKVLDEAVQELRENEFKDLFETKPGDLKLSLPDTVIETDLQVVIPERYVSNISERLALYTRLDSLQNDEELQAFRQEIIDRFGPMPEEVKNLIKMVNVRWKAEQLYLEKLTIKNNILKGYFVSNGNDDFFRSDQFGKVIEYIKRNPTKCSLKESKGRPIFTHTDVFSVEQLDEILGAMTN*