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SCNpilot_cont_300_bf_scaffold_95_curated

Search features with annotation key words

Displaying items 1-30 of 304 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_95_curated_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(405..2036)
DNA (1632bp) protein (544aa)
delta-1-pyrroline-5-carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12]
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003644DC5
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ADB41489.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2255..3565
DNA (1311bp) protein (437aa)
threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1]
threonine synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003784F92
Threonine synthase {ECO:0000313|EMBL:AKD58015.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_95_curated_3
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3651..5459)
DNA (1809bp) protein (603aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000362853E
Uncharacterized protein {ECO:0000313|EMBL:AKD58016.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_95_curated_4
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5945..6826)
DNA (882bp) protein (294aa)
Methyltransferase type 12 n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QG23_SPILD
Methyltransferase {ECO:0000313|EMBL:AKD58017.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
type 12 methyltransferase
SCNpilot_cont_300_bf_scaffold_95_curated_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6902..8773)
DNA (1872bp) protein (624aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000362CC66
glucose inhibited division protein A; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8918..12220)
DNA (3303bp) protein (1101aa)
ATPase n=1 Tax=Spirosoma panaciterrae RepID=UPI000370364D
ATPase {ECO:0000313|EMBL:AKD58019.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
chromosome segregation ATPase
SCNpilot_cont_300_bf_scaffold_95_curated_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12239..12592)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D2EA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41483.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12650..13360
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003755951
Phosphoribosyltransferase {ECO:0000313|EMBL:AKD58021.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
phosphoribosyltransferase
SCNpilot_cont_300_bf_scaffold_95_curated_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13446..14702)
DNA (1257bp) protein (419aa)
gliding motility protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003624EA6
gliding motility-associated lipoprotein GldJ
Gliding motility-associated lipoprotein GldJ {ECO:0000313|EMBL:ADB41481.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_10
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14825..18178)
DNA (3354bp) protein (1118aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
transcription-repair coupling factor n=1 Tax=Spirosoma panaciterrae RepID=UPI0003601968
SCNpilot_cont_300_bf_scaffold_95_curated_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18281..18724)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368CECF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41479.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18916..19212)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F29A5
Uncharacterized protein {ECO:0000313|EMBL:AKD58025.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_95_curated_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19225..19872)
DNA (648bp) protein (216aa)
phospholipase n=1 Tax=Spirosoma panaciterrae RepID=UPI000365FB37
phospholipase/carboxylesterase; K06999 phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:ADB41477.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19957..20895)
DNA (939bp) protein (313aa)
diguanylate cyclase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F8ADC
Diguanylate cyclase {ECO:0000313|EMBL:AKD58027.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K15975 glyoxalase family protein
SCNpilot_cont_300_bf_scaffold_95_curated_15
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21045..22103)
DNA (1059bp) protein (353aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
pyruvate dehydrogenase E1 subunit alpha n=1 Tax=Spirosoma panaciterrae RepID=UPI000361C779
SCNpilot_cont_300_bf_scaffold_95_curated_16
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22295..23413
DNA (1119bp) protein (373aa)
DNA repair protein RecF n=1 Tax=Spirosoma panaciterrae RepID=UPI0003810B97
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_17
unknown

Not on your lists

comp(23461..23625)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000377372F
SCNpilot_cont_300_bf_scaffold_95_curated_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23648..24262
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A997B
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB41473.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24249..26744
DNA (2496bp) protein (832aa)
transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI0003652E72
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADB41472.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_20
unknown

Not on your lists

comp(26673..26882)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_95_curated_21
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26920..30354
DNA (3435bp) protein (1145aa)
copper transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A9E0B
Copper transporter {ECO:0000313|EMBL:AKD58031.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
acriflavin resistance protein
SCNpilot_cont_300_bf_scaffold_95_curated_22
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30424..31758
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037DD6B3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41468.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_23
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31828..33126
DNA (1299bp) protein (433aa)
DNA mismatch repair protein MutT n=1 Tax=Spirosoma panaciterrae RepID=UPI0003823131
metallophosphoesterase; K07098
Metallophosphoesterase {ECO:0000313|EMBL:ADB41467.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_24
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33297..34169
DNA (873bp) protein (291aa)
dienelactone hydrolase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
dienelactone hydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003602F4E
Dienelactone hydrolase {ECO:0000313|EMBL:AKD58033.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_95_curated_25
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

34347..34784
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QG02_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41465.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_26
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

34850..35164
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QG01_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41464.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_27
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35257..35685)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003703CC8
Uncharacterized protein {ECO:0000313|EMBL:AKD58035.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
AIG2 family protein
SCNpilot_cont_300_bf_scaffold_95_curated_28
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35758..35964
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00038036F8
Uncharacterized protein {ECO:0000313|EMBL:CCH56645.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_95_curated_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36189..38003
DNA (1815bp) protein (605aa)
GTP-binding protein TypA n=1 Tax=Spirosoma panaciterrae RepID=UPI0003704EF5
GTP-binding protein TypA; K06207 GTP-binding protein
GTP-binding protein TypA {ECO:0000313|EMBL:ADB41461.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_95_curated_30
unknown

Not on your lists

comp(38081..38359)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CFA0D
Displaying items 1-30 of 304 in total

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