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SCNpilot_cont_300_bf_scaffold_401_curated

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_401_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)
predicted N-acetylglucosamine kinase,glucokinase-like (EC:2.7.1.59); K00845 glucokinase [EC:2.7.1.2]
Predicted N-acetylglucosamine kinase,glucokinase-like n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KST7_STEMA
Glucokinase {ECO:0000313|EMBL:EZP46678.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
SCNpilot_cont_300_bf_scaffold_401_curated_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

725..2008
DNA (1284bp) protein (428aa)
Putative glucose/galactose transporter n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CQF3_STEMA
Putative glucose/galactose transporter {ECO:0000313|EMBL:CCP13209.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
glucose/galactose transporter
SCNpilot_cont_300_bf_scaffold_401_curated_3
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2052..3128
DNA (1077bp) protein (359aa)
N-acetylglucosamine utilization transcriptional regulator, LacI family n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8YZP7_XANCT
N-acetylglucosamine utilization transcriptional regulator, LacI family {ECO:0000313|EMBL:EKU24199.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
LacI family transcription regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_401_curated_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3133..4158
DNA (1026bp) protein (342aa)
glmS; glucosamine-6-phosphate deaminase (EC:3.5.99.6); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glucosamine-6-phosphate deaminase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8YZR3_XANCT
Stenotrophomonas maltophilia strain ZBG7B contig_50, whole genome shotgun sequence {ECO:0000313|EMBL:KIP85224.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_cont_300_bf_scaffold_401_curated_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4318..5457
DNA (1140bp) protein (380aa)
nagA; putative N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KAM9_STEMA
SCNpilot_cont_300_bf_scaffold_401_curated_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6038..7126
DNA (1089bp) protein (363aa)
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D4E58F
Membrane protein {ECO:0000313|EMBL:AKC86514.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
transmembrane protein
SCNpilot_cont_300_bf_scaffold_401_curated_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7190..8269
DNA (1080bp) protein (360aa)
peptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035D6803
Uncharacterized protein {ECO:0000313|EMBL:AHY57703.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
peptidase S41
SCNpilot_cont_300_bf_scaffold_401_curated_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8308..9528)
DNA (1221bp) protein (407aa)
cca; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
Multifunctional CCA protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CQX8_STEMA
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_300_bf_scaffold_401_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9525..11483)
DNA (1959bp) protein (653aa)
putative transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-]
Lytic murein transglycosylase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5K9V0_STEMA
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EZP46691.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
SCNpilot_cont_300_bf_scaffold_401_curated_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11670..12077
DNA (408bp) protein (136aa)
biopolymer transporter ExbD n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DFB466
Biopolymer transporter ExbD {ECO:0000313|EMBL:AHY57706.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
exbD5; biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
SCNpilot_cont_300_bf_scaffold_401_curated_11
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12177..13055
DNA (879bp) protein (293aa)
membrane protein n=2 Tax=Xanthomonadaceae RepID=UPI00036F2F95
Integral membrane protein {ECO:0000313|EMBL:EED40188.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein; K11939 inner membrane transporter RhtA
SCNpilot_cont_300_bf_scaffold_401_curated_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13107..13871)
DNA (765bp) protein (255aa)
Putative endonuclease/exonuclease/phosphatase family protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTY9_STRMK
putative endonuclease/exonuclease/phosphatase family protein; K06896
Putative endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:CAQ47395.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCNpilot_cont_300_bf_scaffold_401_curated_13
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13915..14730)
DNA (816bp) protein (272aa)
Protein-disulfide isomerase n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C8U3_9XANT
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AJC47176.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
dsbA; thiol:disulfide interchange protein; K03673 thiol:disulfide interchange protein DsbA rbh
SCNpilot_cont_300_bf_scaffold_401_curated_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14850..15494)
DNA (645bp) protein (215aa)
Thiol:disulfide interchange protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3ET12_STEMA
dsbA; putative thiol:disulfide interchange protein; K03673 thiol:disulfide interchange protein DsbA
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_cont_300_bf_scaffold_401_curated_15

Not on your lists

comp(15591..16367)
DNA (777bp) protein (259aa)
Cytochrome c n=1 Tax=uncultured organism RepID=T1WCD2_9ZZZZ
Cytochrome c {ECO:0000313|EMBL:AGU12199.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
cytochrome c4
SCNpilot_cont_300_bf_scaffold_401_curated_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16493..17092
DNA (600bp) protein (200aa)
Probable GTP-binding protein EngB n=2 Tax=Stenotrophomonas maltophilia RepID=G0K2Q5_STEMA
GTP-binding protein engB; K03978 GTP-binding protein
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_cont_300_bf_scaffold_401_curated_17
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17264..18226)
DNA (963bp) protein (321aa)
beta-lactamase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E2CD80
Beta-lactamase {ECO:0000313|EMBL:AHY57721.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
methyl parathion hydrolase
SCNpilot_cont_300_bf_scaffold_401_curated_18
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18334..19167)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F276DD
Transcriptional regulator {ECO:0000313|EMBL:AHY57722.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_401_curated_19
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19167..19871)
DNA (705bp) protein (235aa)
nodulin 21 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003018E80
Nodulin 21 {ECO:0000313|EMBL:AHY57723.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_401_curated_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20213..21592
DNA (1380bp) protein (460aa)
glutamate--cysteine ligase (EC:6.3.2.2); K01919 glutamate--cysteine ligase [EC:6.3.2.2]
Glutamate--cysteine ligase {ECO:0000313|EMBL:CCH14101.1}; EC=6.3.2.2 {ECO:0000313|EMBL:CCH14101.1};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Glutamate--cysteine ligase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSQ9_STEMA
SCNpilot_cont_300_bf_scaffold_401_curated_21
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21647..22282
DNA (636bp) protein (212aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
glutathione S-transferase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI0003675A3F
Glutathione S-transferase {ECO:0000313|EMBL:KJV41523.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
SCNpilot_cont_300_bf_scaffold_401_curated_22
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22427..22669
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK12_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM51836.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_401_curated_23
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22784..23059
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KJH9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:AHY57736.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_401_curated_24
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23196..24305
DNA (1110bp) protein (370aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
adhC; S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L3N6_9GAMM
SCNpilot_cont_300_bf_scaffold_401_curated_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24359..25189
DNA (831bp) protein (277aa)
S-formylglutathione hydrolase (EC:3.1.2.12); K01070 S-formylglutathione hydrolase [EC:3.1.2.12]
S-formylglutathione hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DA08CC
Stenotrophomonas maltophilia strain ZBG7B contig_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86240.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_cont_300_bf_scaffold_401_curated_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25286..26722
DNA (1437bp) protein (479aa)
Diguanylate cyclase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2N8_STEMA
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AEM52737.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_300_bf_scaffold_401_curated_27
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27124..27810)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DB5A5E
ATP-binding domain-containing protein {ECO:0000313|EMBL:AKC86979.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein; K06927
SCNpilot_cont_300_bf_scaffold_401_curated_28
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27811..28149)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z4E4_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EKU25820.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_401_curated_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28220..29164)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037137E3
Uncharacterized protein {ECO:0000313|EMBL:KDE91729.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
putative DegV family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_401_curated_30
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29292..30557)
DNA (1266bp) protein (422aa)
amidohydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F4501D
Amidohydrolase {ECO:0000313|EMBL:AHY57753.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
Displaying items 1-30 of 51 in total

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