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SCNpilot_cont_300_bf_scaffold_4005_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4005_curated_1
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..296)
DNA (294bp) protein (98aa)
YggS family pyridoxal phosphate enzyme n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XC49_DELAC
alanine racemase domain-containing protein; K06997
Uncharacterized protein {ECO:0000313|EMBL:KIN90742.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
SCNpilot_cont_300_bf_scaffold_4005_curated_2
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(382..2907)
DNA (2526bp) protein (842aa)
C-di-GMP phosphodiesterase A n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SS70_XANCT
C-di-GMP phosphodiesterase A {ECO:0000313|EMBL:CCP38909.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
c-di-GMP phosphodiesterase A
SCNpilot_cont_300_bf_scaffold_4005_curated_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2911..3987)
DNA (1077bp) protein (359aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
two-component system response regulatory protein; K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
chemotaxis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EEE553
SCNpilot_cont_300_bf_scaffold_4005_curated_4
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3984..4580)
DNA (597bp) protein (199aa)
chemoreceptor glutamine deamidase CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44]
Probable chemoreceptor glutamine deamidase CheD {ECO:0000255|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000255|HAMAP-Rule:MF_01440};; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 /; NCPPB 528 / LMG 568 / P 25).;"
Probable chemoreceptor glutamine deamidase CheD n=5 Tax=Xanthomonas RepID=CHED_XANC8 rbh
SCNpilot_cont_300_bf_scaffold_4005_curated_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4577..5422)
DNA (846bp) protein (282aa)
cheR; Chemotaxis protein methyltransferase CheR (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410, ECO:0000313|EMBL:CCH12572.1};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
chemotaxis protein CheR n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003612A31
SCNpilot_cont_300_bf_scaffold_4005_curated_6
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5432..5587)
DNA (156bp) protein (52aa)
Methyl-accepting chemotaxis protein n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CCW7_XANCA
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AEL07018.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
Displaying 6 items

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