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SCNpilot_cont_300_bf_scaffold_154_curated

Search features with annotation key words

Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_154_curated_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3037..4161)
DNA (1125bp) protein (375aa)
Aminoglycoside phosphotransferase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAD3_9GAMM
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EZP42836.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
putative aminoglycoside phosphotransferase
SCNpilot_cont_300_bf_scaffold_154_curated_2
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4351..4635)
DNA (285bp) protein (95aa)
Helix-turn-helix protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CAT6_9XANT
Helix-turn-helix protein {ECO:0000313|EMBL:EGD17360.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
XRE family transcripitonal regulator
SCNpilot_cont_300_bf_scaffold_154_curated_3
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5035..7449
DNA (2415bp) protein (805aa)
TonB-dependent receptor-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFR3_9GAMM
TonB dependent transporter protein {ECO:0000313|EMBL:AGV39333.1}; TaxID=56448 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola.;"
outer membrane receptor for ferrienterochelin and colicins
SCNpilot_cont_300_bf_scaffold_154_curated_4
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7487..9577
DNA (2091bp) protein (697aa)
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FGX7_XANCI
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein {ECO:0000313|EMBL:CCG37614.1}; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
prolyl oligopeptidase family protein
SCNpilot_cont_300_bf_scaffold_154_curated_5
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9574..11316)
DNA (1743bp) protein (581aa)
Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CAT3_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KGK59370.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
asparagine synthase (glutamine-hydrolyzing)
SCNpilot_cont_300_bf_scaffold_154_curated_6
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11316..12002)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FGX9_XANCI
Uncharacterized protein {ECO:0000313|EMBL:CCG37616.1}; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_154_curated_7
unknown

Not on your lists

comp(12054..12191)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_154_curated_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12423..13058)
DNA (636bp) protein (212aa)
GntR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJN9_9GAMM
GntR family transcriptional regulator {ECO:0000313|EMBL:EIL87430.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_154_curated_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13197..14288
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000375CAF3
Uncharacterized protein {ECO:0000313|EMBL:GAD23331.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein; K09927 hypothetical protein
SCNpilot_cont_300_bf_scaffold_154_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14492..15763
DNA (1272bp) protein (424aa)
Putative hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFV6_9GAMM
Putative hydrolase {ECO:0000313|EMBL:EIL98347.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative hydrolase
SCNpilot_cont_300_bf_scaffold_154_curated_11
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15786..16103)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAH0_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ51520.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_300_bf_scaffold_154_curated_12
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16354..17100
DNA (747bp) protein (249aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000314F0CD
SCNpilot_cont_300_bf_scaffold_154_curated_13
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17193..17540
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000318EAD4
Uncharacterized protein {ECO:0000313|EMBL:KHL26369.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_154_curated_14
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17578..18222)
DNA (645bp) protein (215aa)
ABC transporter n=1 Tax=Xanthomonas arboricola RepID=UPI0003616175
ABC transporter {ECO:0000313|EMBL:GAE53189.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_154_curated_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18219..19145)
DNA (927bp) protein (309aa)
ABC transporter substrate-binding protein n=2 Tax=Stenotrophomonas RepID=B8L126_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCP09636.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C; K02067 putative ABC transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_154_curated_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19149..19958)
DNA (810bp) protein (270aa)
ABC transporter related n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SJ60_STRM5
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACF50228.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_300_bf_scaffold_154_curated_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19971..21083)
DNA (1113bp) protein (371aa)
UPF0393 membrane protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CI52_STEMA
UPF0393 membrane protein {ECO:0000313|EMBL:CCP09638.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein; K02066 putative ABC transport system permease protein
SCNpilot_cont_300_bf_scaffold_154_curated_18
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21168..22442
DNA (1275bp) protein (425aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035FA153
Membrane protein {ECO:0000313|EMBL:AHY60384.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_154_curated_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22575..22946)
DNA (372bp) protein (124aa)
Histone family protein nucleoid-structuring protein H-NS n=2 Tax=Stenotrophomonas maltophilia RepID=B4SJ63_STRM5
Stenotrophomonas maltophilia strain ZBG7B contig_137, whole genome shotgun sequence {ECO:0000313|EMBL:KIP78601.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
histone family protein nucleoid-structuring protein H-NS; K03746 DNA-binding protein H-NS
SCNpilot_cont_300_bf_scaffold_154_curated_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23169..24863)
DNA (1695bp) protein (565aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15]
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Proline--tRNA ligase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJA7_STEMA
SCNpilot_cont_300_bf_scaffold_154_curated_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24936..25319)
DNA (384bp) protein (128aa)
transmembrane anchor protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031A489C
Uncharacterized protein {ECO:0000313|EMBL:AHY60380.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_154_curated_22
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25400..26179
DNA (780bp) protein (260aa)
putative transmembrane CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8]
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EA6CC8
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:AJC45979.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_cont_300_bf_scaffold_154_curated_23
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26176..26631
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EAB79F
Alanine acetyltransferase {ECO:0000313|EMBL:KGK58203.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_154_curated_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26628..27125
DNA (498bp) protein (166aa)
Ribosomal-protein-alanine N-acetyltransferase {ECO:0000313|EMBL:CCP09645.1}; EC=2.3.1.128 {ECO:0000313|EMBL:CCP09645.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
Ribosomal-protein-alanine N-acetyltransferase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CJE4_STEMA
SCNpilot_cont_300_bf_scaffold_154_curated_25
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27010..27957)
DNA (948bp) protein (316aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031A0723
Membrane protein {ECO:0000313|EMBL:AHY60376.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_154_curated_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28046..30886)
DNA (2841bp) protein (947aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U0W0_STEMA
SCNpilot_cont_300_bf_scaffold_154_curated_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30919..31119)
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=G0JWZ3_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM49881.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_300_bf_scaffold_154_curated_28
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31129..31554)
DNA (426bp) protein (142aa)
DNA polymerase III subunit chi; K02339 DNA polymerase III subunit chi [EC:2.7.7.7]
DNA polymerase III holoenzyme chi subunit n=2 Tax=Stenotrophomonas RepID=B8L115_9GAMM
DNA polymerase III subunit chi {ECO:0000313|EMBL:EZP43966.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
SCNpilot_cont_300_bf_scaffold_154_curated_29
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31637..33109)
DNA (1473bp) protein (491aa)
pepA; cytosol aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1]
multifunctional aminopeptidase A n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F6398C
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_300_bf_scaffold_154_curated_30
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33215..34297
DNA (1083bp) protein (361aa)
Lipopolysaccharide export system permease protein lptF n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0STE7_XANCT
Lipopolysaccharide export system permease protein lptF {ECO:0000313|EMBL:CCP39363.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
putative transmembrane permease; K07091 lipopolysaccharide export system permease protein
Displaying items 1-30 of 153 in total

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