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SCNpilot_cont_300_bf_scaffold_156_curated

Search features with annotation key words

Displaying items 1-30 of 612 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_156_curated_1
unknown

Not on your lists

3..68
DNA (66bp) protein (22aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_156_curated_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(65..2164)
DNA (2100bp) protein (700aa)
glycosyl transferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E0E451
Glycosyltransferase {ECO:0000313|EMBL:EMI49046.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
Glycosyltransferase
SCNpilot_cont_300_bf_scaffold_156_curated_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2261..4666
DNA (2406bp) protein (802aa)
mrcB; Multimodular transpeptidase-transglycosylase (EC:2.4.1.129 3.4.-.-); K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-]
penicillin-binding protein 1B n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000360FADA
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_cont_300_bf_scaffold_156_curated_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4674..5204
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000373C753
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF52793.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_300_bf_scaffold_156_curated_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5241..7274
DNA (2034bp) protein (678aa)
putative ATP-dependent DNA helicase-like protein; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12]
Putative ATP-dependent DNA helicase-related protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FR41_STRMK
Putative ATP-dependent DNA helicase-related protein {ECO:0000313|EMBL:CAQ47094.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCNpilot_cont_300_bf_scaffold_156_curated_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7271..7975
DNA (705bp) protein (235aa)
putative glycoprotease; K14742 hypothetical protease [EC:3.4.-.-]
glycoprotease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DFD619
Glycoprotease {ECO:0000313|EMBL:AHY58033.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_300_bf_scaffold_156_curated_7
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8057..8401)
DNA (345bp) protein (115aa)
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_cont_300_bf_scaffold_156_curated_8
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8439..9314)
DNA (876bp) protein (292aa)
phenazine antibiotic biosynthesis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DBA23C
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:KHM98256.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
Epimerase, PhzC/PhzF; K06998
SCNpilot_cont_300_bf_scaffold_156_curated_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9339..10199)
DNA (861bp) protein (287aa)
phenazine biosynthesis protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DE68A2
phenazine biosynthesis protein PhzF family; K06998
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:ADV26663.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_300_bf_scaffold_156_curated_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10414..13023
DNA (2610bp) protein (870aa)
lysA; Aspartokinase (EC:2.7.2.4 4.1.1.20); K12526 bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
Aspartate kinase {ECO:0000313|EMBL:KDE90948.1}; EC=2.7.2.4 {ECO:0000313|EMBL:KDE90948.1};; EC=4.1.1.20 {ECO:0000313|EMBL:KDE90948.1};; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
Aspartokinase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KKR4_STEMA
SCNpilot_cont_300_bf_scaffold_156_curated_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13105..14460
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000318D5C3
Uncharacterized protein {ECO:0000313|EMBL:CCP10354.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_156_curated_12
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14441..15847
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZG8_9GAMM
SCNpilot_cont_300_bf_scaffold_156_curated_13
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15973..16770
DNA (798bp) protein (266aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Dienelactone hydrolase family protein n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0E8D3_9XANT
Dienelactone hydrolase {ECO:0000313|EMBL:KHL51651.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
SCNpilot_cont_300_bf_scaffold_156_curated_14
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16832..17830)
DNA (999bp) protein (333aa)
ispB; octaprenyl-diphosphate synthase (EC:2.5.1.- 2.5.1.1 2.5.1.10 2.5.1.29); K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90]
octaprenyl-diphosphate synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030765AD
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:AHY59929.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_300_bf_scaffold_156_curated_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18008..19621
DNA (1614bp) protein (538aa)
alpha amylase; K01187 alpha-glucosidase [EC:3.2.1.20]
alpha-glucosidase n=1 Tax=Pseudomonas geniculata RepID=UPI000299F5E9
Alpha-glucosidase {ECO:0000313|EMBL:AHY59928.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_300_bf_scaffold_156_curated_16
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20005..22767)
DNA (2763bp) protein (921aa)
TonB-dependent receptor n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WT46_PSEUU
TonB-dependent receptor {ECO:0000313|EMBL:ADV27275.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_156_curated_17
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23029..25038)
DNA (2010bp) protein (670aa)
glycoside hydrolase; K01187 alpha-glucosidase [EC:3.2.1.20]
alpha-glucosidase n=1 Tax=Xanthomonas axonopodis RepID=UPI000313F3CD
Glycoside hydrolase 97 {ECO:0000313|EMBL:ADV26960.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_300_bf_scaffold_156_curated_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25235..26716
DNA (1482bp) protein (494aa)
Major facilitator superfamily MFS_1 n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SN81_STRM5
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACF50726.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_300_bf_scaffold_156_curated_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26716..28446
DNA (1731bp) protein (577aa)
Cyclomaltodextrin glucanotransferase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KKS7_STEMA
amyM; cyclomaltodextrin glucanotransferase
Cyclomaltodextrin glucanotransferase {ECO:0000313|EMBL:CCH11666.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
SCNpilot_cont_300_bf_scaffold_156_curated_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28538..28918
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KZF8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCP10373.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_156_curated_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28970..30037)
DNA (1068bp) protein (356aa)
Maltose transport gene repressor {ECO:0000313|EMBL:CCP10379.1}; EC=5.1.1.1 {ECO:0000313|EMBL:CCP10379.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
LacI family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E29A6F
LacI family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_156_curated_22
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30075..30419)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M0B8_METRJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB26029.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_300_bf_scaffold_156_curated_23
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30506..31099
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HNL7_ACHXA
hypothetical protein; K09965 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP17056.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_cont_300_bf_scaffold_156_curated_24
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31235..31774
DNA (540bp) protein (180aa)
single-stranded DNA-binding protein n=1 Tax=Xanthomonas oryzae RepID=UPI0003137FBC
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=366649 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. fuscans.;"
ssb; single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein
SCNpilot_cont_300_bf_scaffold_156_curated_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31933..32667)
DNA (735bp) protein (245aa)
NADPH-dependent FMN reductase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B493B7
Arsenic resistance protein ArsH {ECO:0000313|EMBL:EMI47822.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
arsH; Arsenic resistance protein ArsH; K11811 arsenical resistance protein ArsH
SCNpilot_cont_300_bf_scaffold_156_curated_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32685..33017
DNA (333bp) protein (111aa)
ArsR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TVQ9_STEMA
ArsR family transcriptional regulator {ECO:0000313|EMBL:EMI47823.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
arsR; putative ArsR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_156_curated_27
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33072..33584
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031315B7
ArsC family transcriptional regulator {ECO:0000313|EMBL:KGM57785.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
arsC; putative arsenate reductase ArsC
SCNpilot_cont_300_bf_scaffold_156_curated_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33598..34629
DNA (1032bp) protein (344aa)
arsenic transporter n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E2DAEC
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
Arsenical-resistance protein {ECO:0000313|EMBL:AEM51633.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_300_bf_scaffold_156_curated_29
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34818..35984
DNA (1167bp) protein (389aa)
peptidase S58 DmpA; K01266 D-aminopeptidase [EC:3.4.11.19]
Peptidase S58 DmpA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH71_9BACT
D-aminopeptidase {ECO:0000313|EMBL:AKC88307.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
SCNpilot_cont_300_bf_scaffold_156_curated_30
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36036..37145)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T232_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT67950.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
Displaying items 1-30 of 612 in total

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