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SCNpilot_cont_300_bf_scaffold_340_curated_17

Organism: scnpilot_dereplicated_Stenotrophomonas_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 18664..19674

Top 3 Functional Annotations

Value Algorithm Source
Putative signal transduction protein n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RVZ7_XANCB similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 329.0
  • Bit_score: 280
  • Evalue 2.10e-72
GGDEF domain-containing protein {ECO:0000313|EMBL:GAE52017.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 328.0
  • Bit_score: 284
  • Evalue 1.60e-73
putative signal protein with GGDEF domain similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 329.0
  • Bit_score: 280
  • Evalue 6.70e-73

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Taxonomy

Xanthomonas arboricola → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGAAACCTGCCGCCGGAACGCCGACGCCCCCCTCGCTGCCACGCGAACTGCGCAGCATACCGCTGCGTACCATCGCCCCGGTCGCCACGCTGGCTTTGATGGTGTTCGCCGGCTGGCTGGCATGGCAGCGGCTGCCGTTGCAGTCACTGGCGGCGCTGGCCTGCGCGACGCCGGCCGCGGTCGCCACCTGGCTGGTGCACAAGCATGCCGTGCAACTGTCCAGCGCCGGCCTGCTGCTGTGCCTGGTGAACGTGGCCGGGTGCCTGCTCGCTGCCGGCGAGCTGGGCCAGCGCGCCCTGCCCTGGTCGCTGCTGGCGCTGATGGCCAATTTCTTCCTGGTCCACAATCGCATCGCCACGCCGGCGAACTTGCTGCTGGTGGCCGGCCTGCTGGCGATACCGGGGGTGCTGCGCGCCCCCGCGCTCGATATCCAGGCGCTGGTGGTGATGGGCCTGATCATGGCTTTCGGCTTCCACTTCTCGCGGCGCCTGCAGGGCGACCGCACGCGGCTCGAACTACTGGCCTCGCTCGACGAGCTGACCGGCCTGCCTAACCGCCGCGCGCTGGAAAAGACCCTGATGCAGCAGATCGGCAGCGCCCGCAACGGGCGTTTCCGGAGTGCGCTGGTGATCCTGGACATCGACCACTTCAAGGACGTCAACGACCACTACGGGCATACCGCCGGCGACAATGCGCTGGTCGAGCTGGCGGCGATCCTGCGGCTGGAGCTGCGCGAGCAGGACAGGGTCTTCCGCTTCGGTGGCGAGGAGTTCGTGATCCTGGCCGAGGCCGGCAACCGCGACGCACTGGCCAGCTTCACCGAGCGGGTGCGCGAATCGGTCCAGCAATCGCTGCACGGCCCCGGCGGCGGCATCACCATCTCGCTGGGCGCGGCCATGTACGCCGGCGAGCAGTACTGGCAGGACTGGTTCTCGCGCGCCGACGCGGCGCTGTACCTGGCCAAGGGCAACGGCCGCAACAGCGTGGTGATCGCCGACGACCTGGGCTGA
PROTEIN sequence
Length: 337
MKPAAGTPTPPSLPRELRSIPLRTIAPVATLALMVFAGWLAWQRLPLQSLAALACATPAAVATWLVHKHAVQLSSAGLLLCLVNVAGCLLAAGELGQRALPWSLLALMANFFLVHNRIATPANLLLVAGLLAIPGVLRAPALDIQALVVMGLIMAFGFHFSRRLQGDRTRLELLASLDELTGLPNRRALEKTLMQQIGSARNGRFRSALVILDIDHFKDVNDHYGHTAGDNALVELAAILRLELREQDRVFRFGGEEFVILAEAGNRDALASFTERVRESVQQSLHGPGGGITISLGAAMYAGEQYWQDWFSRADAALYLAKGNGRNSVVIADDLG*