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scnpilot_expt_500_bf_sub50_scaffold_5_curated

Search features with annotation key words

Displaying items 1-30 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_500_bf_sub50_scaffold_5_curated_1
unknown

Not on your lists

118..537
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_expt_500_bf_sub50_scaffold_5_curated_2
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

629..1204
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RB40_9RHOO
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
scnpilot_expt_500_bf_sub50_scaffold_5_curated_3
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1337..1897
DNA (561bp) protein (187aa)
RibD domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DBF7_MYXXD
riboflavin biosynthesis protein RibD domain-containing protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_4
Halomonas sp. KO116, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2423..3295
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Halomonas sp. HAL1 RepID=G4FCJ8_9GAMM
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:AJY49478.1}; TaxID=1504981 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. KO116.;"
hypothetical protein
scnpilot_expt_500_bf_sub50_scaffold_5_curated_5
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3393..3851
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7NJ69_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS82439.1}; TaxID=1397528 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.;"
hypothetical protein; K09796 hypothetical protein
scnpilot_expt_500_bf_sub50_scaffold_5_curated_6
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3848..4459
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSQ4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR21324.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
putative Electron transport protein SCO1/SenC
scnpilot_expt_500_bf_sub50_scaffold_5_curated_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4636..5586)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A68DD
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_8
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5670..7466)
DNA (1797bp) protein (599aa)
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00035D9F06
ABC transporter permease and ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_expt_500_bf_sub50_scaffold_5_curated_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7514..8386)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DB234
putative esterase of the alpha-beta hydrolase superfamily
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8649..9218)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035F806C
conserved hypothethical protein, Phosphatidylethanolamine-binding protein family, UPF0098
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9299..10006)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E1D85
hypothetical protein; K09915 hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10138..10629
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A661E
putative Signal transduction histidine kinase
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10631..10921
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381E53F
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10958..11524)
DNA (567bp) protein (189aa)
hypothetical protein id=12494696 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11720..12094
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A4324
transmembrane protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12078..12581
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381DC7C
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12578..13336
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E9D15
transmembrane transcriptional regulator (anti-sigma factor)
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13407..14270)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003733210
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14260..16431)
DNA (2172bp) protein (724aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein id=1355379 bin=GWE1_T_denit_62_9 species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_20
unknown

Not on your lists

comp(16428..16538)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_expt_500_bf_sub50_scaffold_5_curated_21
unknown

Not on your lists

16736..16966
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_expt_500_bf_sub50_scaffold_5_curated_22
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17095..18228
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003782FDF
mcp; methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:BAL97382.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
scnpilot_expt_500_bf_sub50_scaffold_5_curated_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18259..19191
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364FB08
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19194..20246
DNA (1053bp) protein (351aa)
homoserine O-succinyltransferase (EC:2.3.1.46); K00651 homoserine O-succinyltransferase [EC:2.3.1.46]
homoserine O-succinyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CFBA2
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20243..21337
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000379DE55
ABC transporter permease; K02066 putative ABC transport system permease protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21337..22104
DNA (768bp) protein (256aa)
iron ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003822162
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22094..23041
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DA0D9
ABC-type transport system periplasmic component; K02067 putative ABC transport system substrate-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23038..23640
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003609858
putative lipoprotein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23688..24116
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AE73C
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_500_bf_sub50_scaffold_5_curated_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24136..24816)
DNA (681bp) protein (227aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037057FE
hypothetical protein; K09792 hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 199 in total

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