name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..844)
|
hypothetical protein, partial n=1 Tax=Thiobacillus thioparus RepID=UPI0003736D19
methyl-accepting chemotaxis sensory transducer
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(893..1396)
|
purine-binding chemotaxis protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D5A8E
CheW protein; K03408 purine-binding chemotaxis protein CheW
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1421..3499)
|
signal transduction histidine kinase CheA-like protein; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
chemotaxis protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B6818
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3545..3907)
|
Fis family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI0003610FC0
response regulator receiver domain-containing protein; K03413 two-component system, chemotaxis family, response regulator CheY
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3962..4522)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D24FD
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4531..5430)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036CDAC2
flgL; flagellar hook-associated protein FlgL; K02397 flagellar hook-associated protein 3 FlgL
Flagellin, flagellar hook-associated protein 3 FlgL {ECO:0000313|EMBL:AAZ97580.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5436..7343)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003806CDC
flgK; flagellar hook-associated protein FlgK; K02396 flagellar hook-associated protein 1 FlgK
Flagellar hook-associated protein {ECO:0000313|EMBL:AAZ97581.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7424..8374)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003798E2F
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; K02395 flagellar protein FlgJ
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8375..9472)
|
flagellar P-ring protein FlgI n=1 Tax=Thiobacillus thioparus RepID=UPI00037F9873
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9485..10153)
|
flagellar L-ring protein FlgH n=1 Tax=Thiobacillus thioparus RepID=UPI00038187EA
flagellar L-ring protein FlgH; K02393 flagellar L-ring protein precursor FlgH
Tax=GWE1_Thiobacillus_62_9_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10162..10944)
|
flagellar basal body rod protein FlgG n=1 Tax=Thiobacillus thioparus RepID=UPI000377B500
flagellar basal body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10970..11710)
|
flagellar basal body rod protein FlgF n=1 Tax=Thiobacillus thioparus RepID=UPI00035C1362
flgF; flagellar basal body rod protein FlgF; K02391 flagellar basal-body rod protein FlgF
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11736..12962)
|
flagellar hook protein FlgE n=1 Tax=Thiobacillus thioparus RepID=UPI0003768699
flgE; flagellar hook protein FlgE; K02390 flagellar hook protein FlgE
Tax=GWE1_Thiobacillus_62_9_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13019..13684)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BBA3E
flgD; flagellar basal body rod modification protein; K02389 flagellar basal-body rod modification protein FlgD
Flagellar basal-body rod modification protein FlgD {ECO:0000313|EMBL:AAZ97588.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13710..14114)
|
flagellar basal body rod protein FlgC n=1 Tax=Thiobacillus thioparus RepID=UPI000380CFBC
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14127..14534)
|
flagellar biosynthesis protein FlgB n=1 Tax=Thiobacillus thioparus RepID=UPI00035DCDC6
flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14706..15422
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368DD23
flgA; flagellar basal body P-ring biosynthesis protein FlgA; K02386 flagella basal body P-ring formation protein FlgA
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15521..15817
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361F3AE
putative anti-sigma-28 factor, FlgM; K02398 negative regulator of flagellin synthesis FlgM
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15804..16292
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036260D3
putative flagella synthesis protein FlgN; K02399 flagella synthesis protein FlgN
Putative flagella synthesis protein FlgN {ECO:0000313|EMBL:AAZ97593.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16309..18138)
|
mnmC, trmC, yfcK; 5-methylaminomethyl-2-thiouridine methyltransferase; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_01102};; Includes:; tRNA (mnm(5)s(2)U34)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01102}; EC=2.1.1.61 {ECO:0000255|HAMAP-Rule:MF_01102};; Includes:; FAD-dependent cmnm(5)s(2)U34 oxidoreductase {ECO:0000255|HAMAP-Rule:MF_01102}; EC=1.5.-.- {ECO:0000255|HAMAP-Rule:MF_01102};; TaxID=292415 species="Bacteria; Prot
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003764590
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18183..19337
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360E6B1
secretion protein HlyD; K02005 HlyD family secretion protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19334..20005
|
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00035E0465
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20247..21449
|
peptide ABC transporter permease n=1 Tax=Thiobacillus thioparus RepID=UPI00036B9511
hypothetical protein; K02004 putative ABC transport system permease protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21446..22645
|
peptide ABC transporter permease n=1 Tax=Thiobacillus thioparus RepID=UPI0003623CEB
hypothetical protein; K02004 putative ABC transport system permease protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22877..23299
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003688540
putative periplasmic protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23352..23897)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035FA708
flavin reductase-like protein
Flavin reductase-like protein {ECO:0000313|EMBL:AAZ97596.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24104..24424)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381CA9C
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24559..25725
|
methylated-DNA--protein-cysteine methyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] id=12494662 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ada; bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25722..26120
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036824FC
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_expt_500_bf_sub50_scaffold_7_curated_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26199..27110)
|
heterodisulfide reductase, B subunit (EC:1.8.98.1); K03389 heterodisulfide reductase subunit B [EC:1.8.98.1]
heterodisulfide reductase n=1 Tax=Thiobacillus thioparus RepID=UPI000370E3C9
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|