ggKbase home page

scnpilot_expt_500_bf_sub50_scaffold_12_curated_8

Organism: scnpilot_dereplicated_Thiobacillus_1

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 7886..8086

Top 3 Functional Annotations

Value Algorithm Source
Phage transcriptional regulator AlpA n=6 Tax=Pseudomonas RepID=L1M360_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 62.0
  • Bit_score: 88
  • Evalue 3.10e-15
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:GAO23812.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 62.0
  • Bit_score: 88
  • Evalue 4.30e-15
excisionase family DNA binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 62.0
  • Bit_score: 87
  • Evalue 1.30e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGATCGAAGCCGGGCTGGACATCCTGACGCTGGCCGAGGTCGCCAGCTACCTGCGGGTAACGAAACGCACGTTATACCGGCTTGCCCAGGAAGGGACGTTGCCAGCGTTCAAGCTCGGCGGTACTTGGCGGTTTCGGCGCGATGAACTCAATCAGTGGATCACTGAGAACATCGGCAAACAACGGATCGGGGACCCATGA
PROTEIN sequence
Length: 67
MIEAGLDILTLAEVASYLRVTKRTLYRLAQEGTLPAFKLGGTWRFRRDELNQWITENIGKQRIGDP*