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scnpilot_p_inoc_sub60_scaffold_81_curated

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_81_curated_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47..1591)
DNA (1545bp) protein (515aa)
ubiB, aarF, yigQ, yigR; putative ubiquinone biosynthesis protein UbiB (EC:1.14.13.-); K03688 ubiquinone biosynthesis protein
ubiquinone biosynthesis protein UbiB n=1 Tax=Thiobacillus denitrificans RepID=UPI0003791848
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1588..2193)
DNA (606bp) protein (202aa)
Putative uncharacterized protein id=1320530 bin=GWE1_T_denit_62_9 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein; K03690 hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2190..2924)
DNA (735bp) protein (245aa)
2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase (EC:2.1.1.-); K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036868BE
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3062..3754
DNA (693bp) protein (231aa)
Two component Transcriptional regulator, Winged helix family id=1320528 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
two component transcriptional regulator; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3786..5132
DNA (1347bp) protein (449aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
histidine kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F80A8
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5101..5523)
DNA (423bp) protein (141aa)
Putative uncharacterized protein id=1320526 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5584..5847)
DNA (264bp) protein (88aa)
Putative uncharacterized protein id=1320525 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6744..10514)
DNA (3771bp) protein (1257aa)
FAD-linked oxidase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B4750
(S)-2-hydroxy-acid oxidase {ECO:0000313|EMBL:AAZ96172.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
(S)-2-hydroxy-acid oxidase
scnpilot_p_inoc_sub60_scaffold_81_curated_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10659..11282
DNA (624bp) protein (208aa)
hypothetical protein; K08984 putative membrane protein id=12495822 bin=THIO_MID species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K08984 putative membrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11345..12427)
DNA (1083bp) protein (361aa)
quinolinate synthetase; K03517 quinolinate synthase [EC:2.5.1.72]
quinolinate synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CA922
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12555..13208
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D67E8
hypothetical protein; K10763 DnaA-homolog protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13209..13586)
DNA (378bp) protein (126aa)
thioredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BC054
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_81_curated_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13757..14023)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A9EB0
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14195..17281)
DNA (3087bp) protein (1029aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003643564
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17328..18374)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00038131ED
RND family efflux transporter MFP subunit 2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18541..19479
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036899FE
sulfite oxidase-like oxidoreductase; K07147
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19479..20099
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366462A
sulfite oxidase subunit YedZ
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_18
unknown

Not on your lists

comp(20556..20753)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_p_inoc_sub60_scaffold_81_curated_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21055..22299)
DNA (1245bp) protein (415aa)
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20]
diaminopimelate decarboxylase n=1 Tax=Thiobacillus denitrificans RepID=UPI000363206B
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22420..22755
DNA (336bp) protein (112aa)
Protein CyaY id=1347829 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
CyaY protein; K06202 CyaY protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22769..23356
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000381EE2D
MarR family transcriptional regulator
Transcriptional Regulator, MarR family {ECO:0000313|EMBL:AAZ96181.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_81_curated_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23353..24741)
DNA (1389bp) protein (463aa)
argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1]
Argininosuccinate lyase {ECO:0000255|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000255|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000255|HAMAP-Rule:MF_00006}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
argininosuccinate lyase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037670D5
scnpilot_p_inoc_sub60_scaffold_81_curated_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24759..25805
DNA (1047bp) protein (349aa)
two-component system sensor ATPase; K08082 two-component system, LytT family, sensor histidine kinase AlgZ [EC:2.7.13.3]
histidine kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00037F1DCD
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25762..26532
DNA (771bp) protein (257aa)
transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00035DA162
LytR/AlgR family transcriptional regulator; K08083 two-component system, LytT family, response regulator AlgR
Response regulator receiver domain protein (CheY) {ECO:0000313|EMBL:AAZ96184.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_81_curated_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26717..27283
DNA (567bp) protein (189aa)
hypothetical protein; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13]
NUDIX hydrolase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003760F63
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27332..31018)
DNA (3687bp) protein (1229aa)
metH; B12-dependent methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
methionine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D6956
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:AAZ96187.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_81_curated_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31291..31677
DNA (387bp) protein (129aa)
sulfurtransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003813F9E
rhodanese-like protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31722..32753)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A8D27
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_81_curated_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32750..34240)
DNA (1491bp) protein (497aa)
Fis family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI000361D35B
Mg chelatase-like protein; K07391 magnesium chelatase family protein
Mg chelatase-related protein {ECO:0000313|EMBL:AAZ96190.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_81_curated_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34245..34508)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000378E01C
hypothetical protein; K09806 hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying items 1-30 of 36 in total

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