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scnpilot_p_inoc_sub60_scaffold_80_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_80_curated_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..307
DNA (306bp) protein (102aa)
cbbZ; phosphoglycolate phosphatase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
phosphoglycolate phosphatase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003618094
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_80_curated_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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426..1901
DNA (1476bp) protein (492aa)
anthranilate synthase, component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27]
Anthranilate synthase component I id=1350887 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_80_curated_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2069..3364)
DNA (1296bp) protein (432aa)
Fis family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F1A2C
Fis family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_80_curated_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3528..4796
DNA (1269bp) protein (423aa)
sulfide-quinone reductase (EC:1.-.-.-); K00540 [EC:1.-.-.-]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003762F3B
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_80_curated_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4860..5240)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003642B3C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97396.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_80_curated_6
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5253..6416)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F25D6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34295.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
scnpilot_p_inoc_sub60_scaffold_80_curated_7
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6429..6680)
DNA (252bp) protein (84aa)
hemerythrin n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C8B88
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34296.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
scnpilot_p_inoc_sub60_scaffold_80_curated_8

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comp(6709..7029)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368C949
Uncharacterized protein {ECO:0000313|EMBL:CBI09186.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_sub60_scaffold_80_curated_9
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7489..8697
DNA (1209bp) protein (403aa)
Integrase n=1 Tax=Pseudomonas taiwanensis SJ9 RepID=V7D1H3_9PSED
Integrase {ECO:0000313|EMBL:ESW36184.1}; TaxID=1388762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwanensis SJ9.;"
integrase family protein
scnpilot_p_inoc_sub60_scaffold_80_curated_10
unknown

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8694..8942
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_p_inoc_sub60_scaffold_80_curated_11

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9026..9232
DNA (207bp) protein (69aa)
Transcriptional regulator n=1 Tax=sediment metagenome RepID=D9PIP2_9ZZZZ
Transcriptional regulator {ECO:0000313|EMBL:EFK96569.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
phage regulatory protein, AlpA family
scnpilot_p_inoc_sub60_scaffold_80_curated_12
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9317..10681
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036D6273
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_p_inoc_sub60_scaffold_80_curated_13
unknown

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10790..11056
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_p_inoc_sub60_scaffold_80_curated_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11075..11362
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003789128
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85515.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_sub60_scaffold_80_curated_15
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11881..12573
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00035C4219
Uncharacterized protein {ECO:0000313|EMBL:AJE17351.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
hypothetical protein
scnpilot_p_inoc_sub60_scaffold_80_curated_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12802..13371
DNA (570bp) protein (190aa)
anthranilate synthase component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27]
anthranilate synthase subunit II n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FAA0C
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_80_curated_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13368..14399
DNA (1032bp) protein (344aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18]
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
anthranilate phosphoribosyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000381FA9D
scnpilot_p_inoc_sub60_scaffold_80_curated_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14405..15193
DNA (789bp) protein (263aa)
indole-3-glycerol phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48]
indole-3-glycerol-phosphate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EAA8C
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_80_curated_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15284..16789)
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BB527
hypothetical protein; K06915
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_80_curated_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16937..17140
DNA (204bp) protein (68aa)
NADH dehydrogenase (EC:1.6.99.3); K03885 NADH dehydrogenase [EC:1.6.99.3]
NADH dehydrogenase {ECO:0000313|EMBL:AAZ98173.1}; EC=1.6.99.3 {ECO:0000313|EMBL:AAZ98173.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F4BDB
Displaying 20 items

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