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scnpilot_p_inoc_sub60_scaffold_74_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_74_curated_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..697
DNA (696bp) protein (232aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036917B2
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_74_curated_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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684..1409
DNA (726bp) protein (242aa)
arginyl-tRNA-protein transferase (EC:2.3.2.8); K00685 arginine-tRNA-protein transferase [EC:2.3.2.8]
arginyl-tRNA-protein transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000373E421
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_74_curated_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1406..2248
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000364D5A7
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_74_curated_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2261..3055
DNA (795bp) protein (265aa)
thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45]
Thymidylate synthase id=1340301 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_74_curated_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3077..3604
DNA (528bp) protein (176aa)
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
diacylglycerol kinase n=1 Tax=Thiobacillus thioparus RepID=UPI000380EB41
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_74_curated_6
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3909..5972
DNA (2064bp) protein (688aa)
UPI0003CEDAA4 related cluster n=1 Tax=unknown RepID=UPI0003CEDAA4
Transporter {ECO:0000313|EMBL:ESY72056.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
outer membrane autotransporter barrel domain-containing protein
scnpilot_p_inoc_sub60_scaffold_74_curated_7
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5969..8497
DNA (2529bp) protein (843aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE23 RepID=UPI00036CC191
outer membrane autotransporter barrel domain-containing protein
Tax=BJP_S1_SUB10_Methylophilales_55_32
scnpilot_p_inoc_sub60_scaffold_74_curated_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8782..8988
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D437E
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:AAZ97991.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_74_curated_9
CSP1_5_NC10, NC10, Bacteria

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8999..9283
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035CF19F
hypothetical protein
Tax=CSP1_5_NC10
scnpilot_p_inoc_sub60_scaffold_74_curated_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9315..10376)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI000349911A
Uncharacterized protein {ECO:0000313|EMBL:GAO36182.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
scnpilot_p_inoc_sub60_scaffold_74_curated_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10561..11823)
DNA (1263bp) protein (421aa)
sulfide dehydrogenase (flavocytochrome), flavoprotein subunit (EC:1.-.-.-); K00540 [EC:1.-.-.-]
flavocytochrome C sulfide dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI000362F2FA
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_74_curated_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11843..12145)
DNA (303bp) protein (101aa)
sulfide dehydrogenase (flavocytochrome), cytochrome c subunit (EC:1.-.-.-); K00540 [EC:1.-.-.-]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000380F76C
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_74_curated_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12335..13438)
DNA (1104bp) protein (368aa)
hemH; ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1]
ferrochelatase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003825757
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_74_curated_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13438..14454)
DNA (1017bp) protein (339aa)
HrcA family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI0003698727
hrcA; heat-inducible transcription repressor; K03705 heat-inducible transcriptional repressor
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_74_curated_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14614..15486
DNA (873bp) protein (291aa)
NAD kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23]
inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A3B25
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_74_curated_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15503..17158
DNA (1656bp) protein (552aa)
DNA repair protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000379D694
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N)
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_74_curated_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17155..17643
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FAE19
nuclease (SNase-like)
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_74_curated_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17594..19438)
DNA (1845bp) protein (615aa)
sulfate permease n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F55A0
high affinity sulfate transporter SulP; K03321 sulfate permease, SulP family
Probable high affinity sulfate transporter (SulP) {ECO:0000313|EMBL:AAZ97981.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_74_curated_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19501..19929
DNA (429bp) protein (143aa)
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI0003765A3A
cytochrome c, class IC
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_74_curated_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19939..20253
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000376AE31
cytochrome c, class IC
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 20 items

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