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scnpilot_p_inoc_sub60_scaffold_136_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_136_curated_1
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..355
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46M71_CUPPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ65755.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
scnpilot_p_inoc_sub60_scaffold_136_curated_2
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(468..1340)
DNA (873bp) protein (291aa)
Sigma-54 interacting regulator n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AZU6_9DELT
Quorum-sensing regulator protein F {ECO:0000313|EMBL:EXI78379.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
putative sigma54 specific transcriptional regulator
scnpilot_p_inoc_sub60_scaffold_136_curated_3
unknown

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1516..1806
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_p_inoc_sub60_scaffold_136_curated_4
unknown

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1821..2144
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_p_inoc_sub60_scaffold_136_curated_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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2141..2413
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTB7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDH46350.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
scnpilot_p_inoc_sub60_scaffold_136_curated_6
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2473..2607
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E2B6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDM31297.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM1035.;"
scnpilot_p_inoc_sub60_scaffold_136_curated_7
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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2604..4271
DNA (1668bp) protein (556aa)
Type III restriction enzyme, res subunit family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYB4_9GAMM
Type III restriction enzyme, res subunit family {ECO:0000313|EMBL:EEB78671.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
hypothetical protein
scnpilot_p_inoc_sub60_scaffold_136_curated_8
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4370..5149
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K7X1_AZOSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL94926.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
scnpilot_p_inoc_sub60_scaffold_136_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5181..5804
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W346_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93887.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_p_inoc_sub60_scaffold_136_curated_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5925..8231)
DNA (2307bp) protein (769aa)
Putative uncharacterized protein id=1317112 bin=GWE1_T_denit_62_9 species=endosymbiont of Riftia pachyptila genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SNF2-like protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_136_curated_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8536..8922)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AFE63
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_136_curated_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9151..10248)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DDE4B
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_136_curated_13
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10389..11060)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FF3E2
Uncharacterized protein {ECO:0000313|EMBL:KHS14664.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;"
hypothetical protein
scnpilot_p_inoc_sub60_scaffold_136_curated_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11286..12014)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E5B20
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_136_curated_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12190..13599)
DNA (1410bp) protein (470aa)
C-5 cytosine-specific DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003648455
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_136_curated_16
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13836..14099
DNA (264bp) protein (88aa)
IS3/IS407-type transposase n=2 Tax=Pseudomonas RepID=H7ESU5_PSEST
Transposase IS3/IS911 {ECO:0000313|EMBL:AJK49901.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
transposase IS3/IS911; K07497 putative transposase
scnpilot_p_inoc_sub60_scaffold_136_curated_17
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14093..14251
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3B513_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:GAD61988.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
transposase
Displaying 17 items

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