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scnpilot_p_inoc_sub60_scaffold_133_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_133_curated_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..428)
-----------------
DNA (426bp)
protein (142aa)
acetyl-CoA carboxylase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003689FFB
biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_133_curated_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(397..927)
-----------------
DNA (531bp)
protein (177aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase id=1366633 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_133_curated_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(986..1513)
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003686884
thioredoxin family protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_133_curated_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1667..2806)
-----------------
DNA (1140bp)
protein (380aa)
cytochrome C biogenesis protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C7B8F
putative transmembrane cytochrome c-type biogenesis transmembrane protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_133_curated_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2826..4853)
-----------------
DNA (2028bp)
protein (676aa)
cytochrome C biogenesis protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F3251
cytochrome c-type biogenesis protein; K07399 cytochrome c biogenesis protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_133_curated_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4918..5544)
-----------------
DNA (627bp)
protein (209aa)
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AE16C
cytochrome c oxidase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_133_curated_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5602..6228
-----------------
DNA (627bp)
protein (209aa)
GTP-binding protein YsxC n=1 Tax=Thiobacillus denitrificans RepID=UPI00037287B6
cell division checkpoint GTPase YihA; K03978 GTP-binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_133_curated_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6490..7425
-----------------
DNA (936bp)
protein (312aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24]
delta-aminolevulinic acid dehydratase n=1 Tax=Thiobacillus denitrificans RepID=UPI000369DC86
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_133_curated_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7500..8282
-----------------
DNA (783bp)
protein (261aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000380083B
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_133_curated_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8292..9158
-----------------
DNA (867bp)
protein (289aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003664EC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96144.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_133_curated_11
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9261..10127)
-----------------
DNA (867bp)
protein (289aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6Y644_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO77927.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
scnpilot_p_inoc_sub60_scaffold_133_curated_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10356..13136)
-----------------
DNA (2781bp)
protein (927aa)
TPR repeat id=1302829 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TPR repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_133_curated_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13175..14095)
-----------------
DNA (921bp)
protein (307aa)
Putative uncharacterized protein id=1302828 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TPR repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 13 items

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