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scnpilot_p_inoc_sub60_scaffold_131_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_131_curated_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..250
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000362ED23
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96866.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_131_curated_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

288..1754
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000373C9A7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96867.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Thiocyanate hydrolase-like (Afipia) Rose Kantor (1/28/16)
scnpilot_p_inoc_sub60_scaffold_131_curated_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1835..2278
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365467A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96868.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_131_curated_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2355..3011
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F551C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96869.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_131_curated_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3050..3418
DNA (369bp) protein (123aa)
cytochrome CBB3 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037527F8
monoheme cytochrome SoxX
Sulfur oxidation protein SoxX {ECO:0000313|EMBL:AAZ96870.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_131_curated_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3456..4289
DNA (834bp) protein (278aa)
SoxAX cytochrome complex subunit A {ECO:0000256|PIRNR:PIRNR038455}; EC=1.8.2.- {ECO:0000256|PIRNR:PIRNR038455};; Protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; Sulfur oxidizing protein A {ECO:0000256|PIRNR:PIRNR038455}; Thiosulfate-oxidizing multienzyme system protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
cytochrome SoxA n=1 Tax=Thiobacillus denitrificans RepID=UPI000378A4EA
diheme cytochrome SoxA
scnpilot_p_inoc_sub60_scaffold_131_curated_7
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4337..4660
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003770C3C
hypothetical protein; K06078 murein lipoprotein
Tax=CG_Beta_01
scnpilot_p_inoc_sub60_scaffold_131_curated_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4793..5392
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036916C8
Uncharacterized protein {ECO:0000313|EMBL:KJB96164.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
scnpilot_p_inoc_sub60_scaffold_131_curated_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5402..6055
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374C3C3
putative p040
Putative p040 {ECO:0000313|EMBL:CCD01206.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
scnpilot_p_inoc_sub60_scaffold_131_curated_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6052..6567
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368C058
Uncharacterized protein {ECO:0000313|EMBL:KJB97142.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
scnpilot_p_inoc_sub60_scaffold_131_curated_11
unknown

Not on your lists

6808..7260
DNA (453bp) protein (151aa)

This feature has no annotations

scnpilot_p_inoc_sub60_scaffold_131_curated_12
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7478..7843
DNA (366bp) protein (122aa)
hypothetical protein id=12498583 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:ERE14017.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;"
phage protein
scnpilot_p_inoc_sub60_scaffold_131_curated_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8565..10457
DNA (1893bp) protein (631aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003820939
CBS signal-transduction protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_131_curated_14
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10603..10929
DNA (327bp) protein (109aa)
hypothetical protein id=12494899 bin=THIO_HI species=Thiothrix disciformis genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
scnpilot_p_inoc_sub60_scaffold_131_curated_15
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10929..12968
DNA (2040bp) protein (680aa)
apl-3; sodium/solute symporter family protein; K14393 cation/acetate symporter id=12494900 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
apl-3; sodium/solute symporter family protein; K14393 cation/acetate symporter
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
scnpilot_p_inoc_sub60_scaffold_131_curated_16
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13002..13706)
DNA (705bp) protein (235aa)
exonuclease; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B2584
Exonuclease {ECO:0000313|EMBL:GAO36423.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
scnpilot_p_inoc_sub60_scaffold_131_curated_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13844..15499)
DNA (1656bp) protein (552aa)
molecular chaperone GroEL n=1 Tax=Thiobacillus denitrificans RepID=UPI000375EA6A
chaperonin GroEL (Hsp60, Cpn10); K04077 chaperonin GroEL
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_131_curated_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15553..15843)
DNA (291bp) protein (97aa)
10 kDa chaperonin id=1367067 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
groES; co-chaperonin GroES; K04078 chaperonin GroES
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_131_curated_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15980..17284
DNA (1305bp) protein (435aa)
aminotransferase (EC:2.6.1.-); K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
adenosylmethionine--8-amino-7-oxononanoate aminotransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000361AD1C
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_131_curated_20
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17587..19113
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374E59A
Uncharacterized protein {ECO:0000313|EMBL:GAO36236.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
scnpilot_p_inoc_sub60_scaffold_131_curated_21
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19110..20114
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B0832
Uncharacterized protein {ECO:0000313|EMBL:GAO36235.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
RND family efflux pump membrane fusion protein
scnpilot_p_inoc_sub60_scaffold_131_curated_22
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20143..21081
DNA (939bp) protein (313aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369F659
ABC transporter ATP-binding protein
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAO36233.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
scnpilot_p_inoc_sub60_scaffold_131_curated_23
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21078..21800
DNA (723bp) protein (241aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003770360
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAO36232.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ABC transporter ATP-binding protein
Displaying 23 items

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