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scnpilot_p_inoc_sub60_scaffold_43_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_43_curated_1
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..2377)
DNA (2376bp) protein (792aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A649E
Glucosidase {ECO:0000313|EMBL:KHD31951.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
hypothetical protein
scnpilot_p_inoc_sub60_scaffold_43_curated_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2582..3163
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371866F
late embryogenesis abundant protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3183..4031)
DNA (849bp) protein (283aa)
Endonuclease/exonuclease/phosphatase id=1343561 bin=GWE1_T_denit_62_9 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Endonuclease/exonuclease/phosphatase; K06896
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4256..8737
DNA (4482bp) protein (1494aa)
Glutamate synthase large subunit {ECO:0000313|EMBL:AAZ98720.1}; EC=1.4.7.1 {ECO:0000313|EMBL:AAZ98720.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
gltB; glutamate synthase subunit alpha (EC:1.4.1.13); K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
glutamate synthase subunit alpha n=1 Tax=Thiobacillus denitrificans RepID=UPI000377647C
scnpilot_p_inoc_sub60_scaffold_43_curated_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8734..10182
DNA (1449bp) protein (483aa)
gltD; glutamate synthase subunit beta (EC:1.4.1.13); K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
glutamate synthase subunit beta n=1 Tax=Thiobacillus denitrificans RepID=UPI00037645BF
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10266..11699
DNA (1434bp) protein (478aa)
signal transduction histidine kinase (EC:2.7.3.-); K07711 two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366F092
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11718..12194
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003633130
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12191..13543
DNA (1353bp) protein (451aa)
Two Component Transcriptional Regulator, Fis family id=1343556 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
two component Fis family transcriptional regulator; K07715 two-component system, NtrC family, response regulator GlrR
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13705..13872
DNA (168bp) protein (56aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000379DB93
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14179..14664
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C1A3F
transport-associated
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14735..15067
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374159B
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15119..16276)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366BFCC
putative transporter protein; K06076 long-chain fatty acid transport protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16546..16950
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C4684
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17044..17613
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003686672
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98731.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_43_curated_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17694..18773
DNA (1080bp) protein (360aa)
uroporphyrinogen decarboxylase HemE (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
uroporphyrinogen decarboxylase n=1 Tax=Thiobacillus denitrificans RepID=UPI000374737F
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18839..19690
DNA (852bp) protein (284aa)
import inner membrane translocase subunit Tim44 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E5B5B
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20030..22213
DNA (2184bp) protein (728aa)
replication restart DNA helicase PriA; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375E7C1
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_43_curated_18
unknown

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22298..22360
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 18 items

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