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scnpilot_p_inoc_sub60_scaffold_27_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_27_curated_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..166
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D55E3
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_2
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(778..1419)
DNA (642bp) protein (214aa)
TetR-family transcriptional regulator n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8H9_AROAE
TetR family transcriptional regulator
TetR-family transcriptional regulator {ECO:0000313|EMBL:CAI06380.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
scnpilot_p_inoc_sub60_scaffold_27_curated_3
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1477..2700
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8I0_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI06379.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
scnpilot_p_inoc_sub60_scaffold_27_curated_4
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2846..3061)
DNA (216bp) protein (72aa)
Integrase catalytic region n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MB12_ACIET
integrase catalytic subunit; K07497 putative transposase
Integrase catalytic region {ECO:0000313|EMBL:ACM33613.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_sub60_scaffold_27_curated_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3830..4141)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AC315
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4180..6453)
DNA (2274bp) protein (758aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036796AA
UPF0313 protein Tbd_2153 {ECO:0000256|HAMAP-Rule:MF_01251}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Elongator protein 3/MiaB/NifB
scnpilot_p_inoc_sub60_scaffold_27_curated_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6538..6864)
DNA (327bp) protein (109aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03772 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
peptidyl-prolyl cis-trans isomerase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DDB97
scnpilot_p_inoc_sub60_scaffold_27_curated_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6972..8369)
DNA (1398bp) protein (466aa)
C4-dicarboxylate ABC transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI0003613133
TRAP dicarboxylate transporter subunit DctM
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8369..8908)
DNA (540bp) protein (180aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003690C37
TRAP transporter, small subunit
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9051..9662)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CD809
putative lipase
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9664..11004)
DNA (1341bp) protein (447aa)
Zn-dependent protease, modulator of DNA gyrase id=1314852 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
microcin-processing peptidase 1; K03592 PmbA protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11065..11628
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00038155D6
hypothetical protein; K09889 ribosome-associated protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11735..15238
DNA (3504bp) protein (1168aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000360EA8C
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15261..16061
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374B4AB
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16050..16772)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C1A8D
transmembrane protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16769..17323)
DNA (555bp) protein (185aa)
mogA; molybdenum cofactor biosynthesis protein MogA; K03831 molybdopterin adenylyltransferase [EC:2.7.7.75]
molybdenum cofactor biosynthesis protein MogA n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D73A0
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17397..17888
DNA (492bp) protein (164aa)
thioredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00035EC858
thioredoxin-like protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17885..19063
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003797F4F
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19071..20048)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003768956
magnesium/cobalt transporter CorA; K03284 magnesium transporter
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20391..22787
DNA (2397bp) protein (799aa)
Ammonia permease id=1314842 bin=GWE1_T_denit_62_9 species=Pleurocapsa minor genus=Pleurocapsa taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22985..24358)
DNA (1374bp) protein (458aa)
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
Phosphomannomutase {ECO:0000313|EMBL:AAZ98091.1}; EC=5.4.2.8 {ECO:0000313|EMBL:AAZ98091.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
phosphoglucomutase n=1 Tax=Thiobacillus denitrificans RepID=UPI000380C459
scnpilot_p_inoc_sub60_scaffold_27_curated_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24390..25367)
DNA (978bp) protein (326aa)
alpha/beta hydrolase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FF9C5
esterase/lipase/thioesterase family protein; K07019
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25393..25815)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F3AE1
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25953..28124
DNA (2172bp) protein (724aa)
family 2 glycosyl transferase; K00694 cellulose synthase (UDP-forming) [EC:2.4.1.12]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003789858
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28156..28845
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A4BDD
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28880..29623)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BBCC6
Na-Ca exchanger/integrin-beta4
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29843..30046)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D2DD3
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_27_curated_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30059..30547)
DNA (489bp) protein (163aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
branched-chain amino acid aminotransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FC347
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 28 items

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