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scnpilot_p_inoc_sub60_scaffold_143_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_143_curated_1

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1..339
DNA (339bp) protein (113aa)
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3); K11180 sulfite reductase, dissimilatory-type alpha subunit [EC:1.8.99.3]
sulfite reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003691A7A
Reverse-type dissimilatory siroheme sulfite reductase subunit A {ECO:0000313|EMBL:ABX82388.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
truncated Rose Kantor (12/9/15)
scnpilot_p_inoc_sub60_scaffold_143_curated_2
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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405..1475
DNA (1071bp) protein (357aa)
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3); K11181 sulfite reductase, dissimilatory-type beta subunit [EC:1.8.99.3] id=12496405 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3); K11181 sulfite reductase, dissimilatory-type beta subunit [EC:1.8.99.3]
Tax=RBG_16_Gallionellales_57_15_curated
scnpilot_p_inoc_sub60_scaffold_143_curated_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1564..1923
DNA (360bp) protein (120aa)
DsrE protein; K07235 tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
DsrE protein id=1364810 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_143_curated_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1935..2330
DNA (396bp) protein (132aa)
sulfur oxidoreductase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003648E3A
DsrF protein; K07236 tRNA 2-thiouridine synthesizing protein C
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_143_curated_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2342..2641
DNA (300bp) protein (100aa)
sulfur relay protein TusB/DsrH n=1 Tax=Thiobacillus denitrificans RepID=UPI000380E00F
DsrH protein; K07237 tRNA 2-thiouridine synthesizing protein B
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_143_curated_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2664..2999
DNA (336bp) protein (112aa)
putative sulfite reductase; K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
Putative sulfite reductase id=1364807 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_143_curated_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3186..3920
DNA (735bp) protein (245aa)
nitrate reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DA333
putative DsrM protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_143_curated_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3971..5494
DNA (1524bp) protein (508aa)
reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E2321
reductase, iron-sulfur binding subunit
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_143_curated_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5555..7516
DNA (1962bp) protein (654aa)
glutamate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037195B3
putative glutamate synthase (NADPH) small subunit
Iron-sulfur cluster-binding protein, GltD family {ECO:0000313|EMBL:AAZ98430.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_143_curated_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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7519..8016
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BBDD8
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_143_curated_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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8013..8792
DNA (780bp) protein (260aa)
iron-sulfur cluster protein; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-]
4Fe-4S ferredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00037758DA
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_143_curated_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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8799..10001
DNA (1203bp) protein (401aa)
molybdopterin oxidoreductase, membrane subunit; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-]
molybdopterin oxidoreductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C008C
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_143_curated_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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10204..11574
DNA (1371bp) protein (457aa)
hydrogenobyrinic acid a,c-diamide synthase / cobyrinate a,c-diamide synthase (EC:6.3.5.9 6.3.5.-); K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
hydrogenase expression protein HypE n=1 Tax=Thiobacillus denitrificans RepID=UPI0003821F02
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_143_curated_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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11593..11928
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000360D190
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_143_curated_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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11934..13373
DNA (1440bp) protein (480aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107); K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
sirohydrochlorin ferrochelatase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A6DF4
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 15 items

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