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scnpilot_p_inoc_sub60_scaffold_102_curated_9

Organism: scnpilot_dereplicated_Thiobacillus_6

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: 9981..10919

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003813482 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 322.0
  • Bit_score: 528
  • Evalue 5.50e-147
peptidoglycan-binding protein LysM; K06194 lipoprotein NlpD similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 309.0
  • Bit_score: 435
  • Evalue 1.20e-119
Peptidoglycan-binding protein LysM {ECO:0000313|EMBL:AAZ96790.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 309.0
  • Bit_score: 435
  • Evalue 5.20e-119

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
GTGATCGGAGTGGCCGCCCGCGGCGGTGCGAGGGCCGCATGGCTGGGCGCACTGCTGCTAGCAATGGCGGGTTGCGTCTCGCATACGCCGGCGCCAGTGAGCGAACGGACCCCGGCGCGCGTCGCCAGCATGCCGCCCACCCCCGCCAAACCCGCCGCGGCGCAGCAGATTGTGCCGTCCGCCAACGGCCTGCACACGGTGCAACGTGGCGATACGCTGTATGCCATTGCGTTTGCCAACAGTCTGGATTACCGCGAAGTTGCCGACTGGAACCGGCTCGAGTCGCCCGACCGCATCCTGGTCGGCCAGGTGCTGCGGCTGACGCCGCCGCCGGGCGCGGTCGAAATCAAGCCGCTCGACGAAGTGCCCGCGCCGAGCGCGCGCCCGCTGCTCGAGCCGCCCTTGCAGCGCGAGCCGCAAGCCGTGTTGCTGGCGTATTCCGAGGCCAACTGGGCGCAGGTGTCGGCGCCGCCCGCAGTGTCGGCGGCACCCGCCGCGGCCCAGCCGGCGCCGGCTGCGGCGCCCGCCGCAGTGCCGCCTGCCGCTCCGGCATCCGCTTCCAGCGCGCCAGTCGACGGCTGGTTGTGGCCGGCCGACGGCACGCTGGCAGGGCGCTTTGGCGCGGCGGGCGGCAAAGGCATCGACATCGTCGGGCAGCGCAACGCACCAGTGAAAGCGGTGGCGCCCGGCAAGGTGGTATACAGCGGCAGCGGCCTGCGCGGCTACGGACGTCTGCTGATCGTCAAGCATGCGGGCGAGTTCCTCTCCGCCTATGCGCACAACGAAACGATCCTGGTGAAGGAAGGCGACAGCGTGAGCGCCGGGCAAAAAATCGCGCTGATGGGCGACAGCGACGCCGATCGGGTTAAACTGCATTTTGAAATCCGCCGTTATGGCAAACCGCTCGATCCACTGAACTACCTGCCGGAGCGTTCATGA
PROTEIN sequence
Length: 313
VIGVAARGGARAAWLGALLLAMAGCVSHTPAPVSERTPARVASMPPTPAKPAAAQQIVPSANGLHTVQRGDTLYAIAFANSLDYREVADWNRLESPDRILVGQVLRLTPPPGAVEIKPLDEVPAPSARPLLEPPLQREPQAVLLAYSEANWAQVSAPPAVSAAPAAAQPAPAAAPAAVPPAAPASASSAPVDGWLWPADGTLAGRFGAAGGKGIDIVGQRNAPVKAVAPGKVVYSGSGLRGYGRLLIVKHAGEFLSAYAHNETILVKEGDSVSAGQKIALMGDSDADRVKLHFEIRRYGKPLDPLNYLPERS*