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scnpilot_p_inoc_sub60_scaffold_102_curated_10

Organism: scnpilot_dereplicated_Thiobacillus_6

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: 10916..11857

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E4213 similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 313.0
  • Bit_score: 596
  • Evalue 1.60e-167
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 316.0
  • Bit_score: 575
  • Evalue 9.40e-162
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 316.0
  • Bit_score: 575
  • Evalue 4.20e-161

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGAGCCGTGAATCCAGTGACGAATCCGAAGACCTGACGCCAGACGATGCCGAAGCGGCACAGCCGGCGGTGGACAGCAGCGAGGAACTGGCGTCGGCCATCCTCGACGAGCCGCAGGTCGATGTCACTCAGCTCTACCTCAACGAAATCGGCCAGGCGCCGCTGCTGACCGCGGCGGAGGAAGTCGCGCTGGCGCGGCGCACCGTGCTGGGCGACTTCGAAGCGCGGCAGACCATGATCGAGCGCAACCTGCGGCTGGTGGTCAACATCGCCAAACATTACGCCAACCGCGGCCTGACGCTGCTCGACCTGGTGGAGGAGGGCAATCTCGGGCTGATCCACGCGCTGGAAAAATTCGATCCCGAGCGCGGTTTCCGCTTCTCCACCTATGCCACCTGGTGGATCCGCCAGAACATCGAGCGCGCGATCATGAACCAGTCGCGCACCATCCGCCTGCCGGTGCACATCATCAAGGAACTCAACATCTATCTGCGTGCCAAGCGGCATCTGGAAACCCACGGCGTAACCGACGCCACCTCGGACGACATCGCCGCGTTGACCGGCCATCCGGTCGAGGACGTGCGCCGCATCATGCGGCTGAACGAAAGAGTGGCATCGCTCGATGCGCCGCTTGAGGTCGACCCCACGCTGTCGCTGGGCGAAACGATCGCCGACGACAATGTCCATCTGCCGGACGAAATGCTGCAGGTCGAAGAAATCGAACACCATGTCCGCGAATGGCTGACTCAGCTCAACGACAAGCAGCGCTGGGTGATCGAGCGGCGCTTCGGCCTGAACGGCTGTGAAGCCTGCACGCTGGAAGACTTGGCGCTCGAACTGCAGGTGACGCGCGAGCGTGTGCGCCAGATCCAGATGGAATCCCTGCGCGTGCTGCGGCAGCTGCTGCGGCGGCGCGGCGTGTCCAAGGACGAACTGTTTTAA
PROTEIN sequence
Length: 314
MSRESSDESEDLTPDDAEAAQPAVDSSEELASAILDEPQVDVTQLYLNEIGQAPLLTAAEEVALARRTVLGDFEARQTMIERNLRLVVNIAKHYANRGLTLLDLVEEGNLGLIHALEKFDPERGFRFSTYATWWIRQNIERAIMNQSRTIRLPVHIIKELNIYLRAKRHLETHGVTDATSDDIAALTGHPVEDVRRIMRLNERVASLDAPLEVDPTLSLGETIADDNVHLPDEMLQVEEIEHHVREWLTQLNDKQRWVIERRFGLNGCEACTLEDLALELQVTRERVRQIQMESLRVLRQLLRRRGVSKDELF*