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scnpilot_p_inoc_sub60_scaffold_303_curated_1

Organism: scnpilot_dereplicated_Thiobacillus_6

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: 3..593

Top 3 Functional Annotations

Value Algorithm Source
channel protein TolC n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B4EB5 similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 194.0
  • Bit_score: 363
  • Evalue 1.10e-97
type I secretion outer membrane protein TolC; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 196.0
  • Bit_score: 311
  • Evalue 2.70e-82
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 194.0
  • Bit_score: 327
  • Evalue 1.60e-86

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
AACCTGCAGGCCGAGATCCAGCGCATCGCCAAGGCCATCGCCGACCAGGAAGTCGAGCGCAACCGCGCCGGCCACTACCCCACGCTCGATGCGGTGGCAGGCTACACCGTCAACAACAATCAGAATTTCGGCACCACGCAGGTGGACACCCGCATCGCCAGCATCGGGCTGGAACTCAACCTGCCGATCTACCAGGGCGGACTCACCAGTTCGCGCGTGCGCGAAGCCGTCGCCAACCAGGAAAAGGCGCGCCAGGATCTGGAAAACGCCACCCGCGAGGCCAGCCTGCAGGCGCGCCAGGCCTGGCTCAACGTCAGCAGCGGCGTCGCCCGCGTGCAGGCGCTGGAACAGGCGCTCACCTCCAGCAAGGCGCAGCTCGAATCCACCAAGCTCGGCCTGCAGGTCGGCGTGCGCACCAACCTCGACGTGCTCAACGCCGAGCAGCAGGTGCTGTCCGCGCGCCGCGACCTCGCCGGCGCGCGCTATGCCTACCTGCTGTCCGGGCTGTCACTCAAGGCCGCCGTCGGCAGCCTCGGCCCGGCCGACCTGGCCGAAATCGACCGCCACCTGAAACCCGCGGCGCCGCAATAA
PROTEIN sequence
Length: 197
NLQAEIQRIAKAIADQEVERNRAGHYPTLDAVAGYTVNNNQNFGTTQVDTRIASIGLELNLPIYQGGLTSSRVREAVANQEKARQDLENATREASLQARQAWLNVSSGVARVQALEQALTSSKAQLESTKLGLQVGVRTNLDVLNAEQQVLSARRDLAGARYAYLLSGLSLKAAVGSLGPADLAEIDRHLKPAAPQ*