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scnpilot_p_inoc_sub60_scaffold_303_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_sub60_scaffold_303_curated_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3..593
DNA (591bp) protein (197aa)
channel protein TolC n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B4EB5
type I secretion outer membrane protein TolC; K12340 outer membrane channel protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_303_curated_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(633..1913)
DNA (1281bp) protein (427aa)
3-deoxy-D-manno-octulosonic-acid transferase transmembrane protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
3-deoxy-D-manno-octulosonic acid transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000382BFEA
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_303_curated_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1969..2979
DNA (1011bp) protein (337aa)
nucleoside-diphosphate-sugar epimerase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
NAD dependent epimerase/dehydratase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003626C02
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AAZ98652.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_303_curated_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3055..3510)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368A276
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97468.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_p_inoc_sub60_scaffold_303_curated_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3703..4881)
DNA (1179bp) protein (393aa)
S-adenosylmethionine synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E2BE9
S-adenosylmethionine synthase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_sub60_scaffold_303_curated_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4917..5948)
DNA (1032bp) protein (344aa)
methylase n=1 Tax=Thiobacillus thioparus RepID=UPI0003609FE6
methyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_303_curated_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6209..7621
DNA (1413bp) protein (471aa)
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A4396
major facilitator superfamily drug efflux transporter
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_303_curated_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7903..8520
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000376F1D7
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_303_curated_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8728..9468)
DNA (741bp) protein (247aa)
pteridine reductase; K03793 pteridine reductase [EC:1.5.1.33]
pteridine reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B391D
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_303_curated_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9543..10688
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DE689
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_sub60_scaffold_303_curated_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10727..11581)
DNA (855bp) protein (285aa)
cation transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000364BB9D
hypothetical protein; K06189 magnesium and cobalt transporter
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_303_curated_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11594..12046)
DNA (453bp) protein (151aa)
Endoribonuclease YbeY {ECO:0000255|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00009};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
heat-shock protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003827700
hypothetical protein; K07042 probable rRNA maturation factor
scnpilot_p_inoc_sub60_scaffold_303_curated_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12033..12989)
DNA (957bp) protein (319aa)
phosphate starvation protein PhoH n=1 Tax=Thiobacillus denitrificans RepID=UPI0003704840
PhoH-like protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_sub60_scaffold_303_curated_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12986..13624)
DNA (639bp) protein (213aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB id=1354784 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 14 items

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