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SCNpilot_expt_300_bf_scaffold_469_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_469_curated_1
R_Gammaproteobacteria_38_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..840)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Legionella pneumophila subsp. pneumophila RepID=I7HNC7_LEGPN
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_38_11_curated
SCNpilot_expt_300_bf_scaffold_469_curated_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(837..1514)
DNA (678bp) protein (226aa)
Uncharacterized protein id=1317122 bin=GWE1_T_denit_62_9 species=Legionella pneumophila genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_300_bf_scaffold_469_curated_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1905..2846
DNA (942bp) protein (314aa)
Tyrosine recombinase XerD id=1317121 bin=GWE1_T_denit_62_9 species=Kangiella koreensis genus=Kangiella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
tyrosine recombinase XerD; K04763 integrase/recombinase XerD
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_300_bf_scaffold_469_curated_4
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2897..3094)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum UW551 RepID=A3RYW0_RALSL
Uncharacterized protein {ECO:0000313|EMBL:EAP71284.1}; TaxID=342110 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum UW551.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_469_curated_5
Pseudomonas chloritidismutans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3137..4435)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QI70_PSECO
Uncharacterized protein {ECO:0000313|EMBL:ESR01503.1}; TaxID=1263865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chloritidismutans AW-1.;"
hypothetical protein rbh
SCNpilot_expt_300_bf_scaffold_469_curated_6
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4435..5649)
DNA (1215bp) protein (405aa)
Prophage LambdaMc01, helicase, SNF2 family n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q603W4_METCA
prophage LambdaMc01, SNF2 family helicase
Prophage LambdaMc01, helicase, SNF2 family {ECO:0000313|EMBL:AAU91285.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
SCNpilot_expt_300_bf_scaffold_469_curated_7
Betaproteobacteria bacterium MOLA814, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5668..7212)
DNA (1545bp) protein (515aa)
RNA polymerase-associated protein RapA {ECO:0000313|EMBL:ESS14719.1}; EC=3.6.4.- {ECO:0000313|EMBL:ESS14719.1};; TaxID=1408164 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="Betaproteobacteria bacterium MOLA814.;"
RNA polymerase-associated protein RapA n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4Y273_9PROT
helicase domain-containing protein
SCNpilot_expt_300_bf_scaffold_469_curated_8
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7719..10925)
DNA (3207bp) protein (1069aa)
hypothetical protein n=1 Tax=Pseudomonas mandelii RepID=UPI00035DBF3F
hypothetical protein rbh
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
SCNpilot_expt_300_bf_scaffold_469_curated_9
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10949..12733)
DNA (1785bp) protein (595aa)
Sea9 n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QLW3_BORBO
Uncharacterized protein {ECO:0000313|EMBL:AIA45192.1}; TaxID=1328324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae KPNIH27.;"
sea9
SCNpilot_expt_300_bf_scaffold_469_curated_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12743..13819)
DNA (1077bp) protein (359aa)
SIR2-like domain protein n=1 Tax=Escherichia coli 2848050 RepID=M8XXK1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KJH06535.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_469_curated_11
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13831..14820)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MQE0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET95555.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
SCNpilot_expt_300_bf_scaffold_469_curated_12
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14820..17639)
DNA (2820bp) protein (940aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MQD9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AET95554.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_469_curated_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17639..17893)
DNA (255bp) protein (85aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6D1V6_PSEST
Strain MEP34 contig_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92513.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
excisionase family DNA binding domain-containing protein
SCNpilot_expt_300_bf_scaffold_469_curated_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18016..19281
DNA (1266bp) protein (422aa)
Metallophosphoesterase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTX6_9GAMM
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AEM46728.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
SCNpilot_expt_300_bf_scaffold_469_curated_15
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19278..22823
DNA (3546bp) protein (1182aa)
SMC domain protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTX5_9GAMM
SMC domain-containing protein
SMC domain protein {ECO:0000313|EMBL:AEM46727.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
SCNpilot_expt_300_bf_scaffold_469_curated_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22947..25253)
DNA (2307bp) protein (769aa)
Putative uncharacterized protein id=1317112 bin=GWE1_T_denit_62_9 species=endosymbiont of Riftia pachyptila genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SNF2-like protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_300_bf_scaffold_469_curated_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25557..25700)
DNA (144bp) protein (48aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AFE63
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 17 items

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