name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_601_curated_1 |
Not on your lists |
728..1324
|
Uncharacterized protein n=3 Tax=mine drainage metagenome RepID=T1C488_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD75653.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_2 |
Not on your lists |
1317..2339
|
Protein containing DUF1814 n=1 Tax=mine drainage metagenome RepID=T0ZEG3_9ZZZZ
Protein containing DUF1814 {ECO:0000313|EMBL:EQD43463.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_3
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2376..4211
|
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LFE6_BURGS
Uncharacterized protein {ECO:0000313|EMBL:AEA61112.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_4
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4215..5948
|
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
DNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
Predicted DNA helicase n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LFE7_BURGS
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_5
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5976..6203)
|
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9KS17_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ03005.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
conjugal transfer protein
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_6
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6200..7465)
|
TrbI-like protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RDY9_PSEAI
Conjugative transfer protein TrbI {ECO:0000313|EMBL:BAP44846.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;"
conjugation TrbI family protein
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7468..8466)
|
conjugative transfer protein TrbG n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002EF05C7
Type IV secretion system protein PtlF {ECO:0000313|EMBL:AKC05780.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
p-type conjugative transfer protein trbg
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8463..9167)
|
Conjugal transfer protein n=2 Tax=Comamonadaceae RepID=B9MII6_ACIET
Conjugal transfer protein Trbf {ECO:0000313|EMBL:GAO21834.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
conjugal transfer protein Trbf; K03200 type IV secretion system protein VirB5
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_9
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9192..10577)
|
Conjugal transfer transmembrane protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LN37_RALME
trbL; conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
Conjugal transfer transmembrane protein {ECO:0000313|EMBL:ABF08439.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_10
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10574..10918)
|
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=N2D047_PSEAI
lipoprotein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10931..11686)
|
P-type conjugative transfer protein TrbJ n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TV30_ALIDB
p-type conjugative transfer protein trbj
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:ADV00562.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_12
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11683..14142)
|
VirB4 family type IV secretion/conjugal transfer ATPase n=4 Tax=Pseudomonas aeruginosa RepID=N2D3B7_PSEAI
Conjugal transfer protein TrbE {ECO:0000313|EMBL:EPZ14906.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
trbE; conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_13
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14155..14427)
|
conjugal transfer protein TrbD n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000381E1AD
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KGM52058.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
trbD1; conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_14
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14424..14816)
|
TrbC-like protein n=3 Tax=Pseudomonas aeruginosa RepID=U8YSE5_PSEAI
Conjugal transfer protein TrbC {ECO:0000313|EMBL:BAP44838.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;"
trbC; conjugal transfer TrbC transmembrane protein; K03197 type IV secretion system protein VirB2
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14813..15862)
|
P-type conjugative transfer ATPase TrbB n=3 Tax=Pseudomonas aeruginosa RepID=U8YMQ2_PSEAI
Putative conjugal transfer protein TrbB {ECO:0000313|EMBL:CEI04072.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
p-type conjugative transfer ATPase trbb; K03196 type IV secretion system protein VirB11
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_16
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15859..16323)
|
Uncharacterized protein n=8 Tax=Pseudomonas aeruginosa RepID=K1CJV3_PSEAI
CopG family transcriptional regulator {ECO:0000313|EMBL:KIZ32670.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16320..18320)
|
Conjugal transfer protein TraG n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IL69_BORPD
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:GAO26443.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
traG1; conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_18
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18503..18781)
|
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WFV4_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EXI88108.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18778..19722)
|
Transcriptional regulator n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WFB8_PSEAI
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB83968.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_20
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19738..21009)
|
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
Serine hydroxymethyltransferase n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PCC21 RepID=J7L364_PECCC
glycine hydroxymethyltransferase
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_21
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21068..23233)
|
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
Acetylornithine aminotransferase n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5ARL6_PSEAI
acetylornithine and succinylornithine aminotransferase
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_22
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23230..24045)
|
Alanine racemase n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3U7V4_ADVKW
Putative pyridoxal-phosphate protein, YggS Family {ECO:0000313|EMBL:AHG62452.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
alanine racemase
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_23
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24152..25453
|
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000381A9F1
GntR family transcription regulator protein {ECO:0000313|EMBL:EZP38943.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
GntR family transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_24
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25564..25800
|
Thioredoxin n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z498_9RHOO
Thioredoxin {ECO:0000313|EMBL:CDI01602.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_25
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25903..26169
|
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TDM4_9GAMM
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KFX69718.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
thioredoxin
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_26
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26135..26464
|
Antioxidant, AhpC/TSA family n=2 Tax=Nitrosococcus oceani RepID=B6C1N3_9GAMM
hypothetical protein
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KFI19596.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_27
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26667..27983
|
L-lactate permease n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y283_PARAH
L-lactate permease
L-lactate permease {ECO:0000313|EMBL:AGT09865.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_28
Halomonas sp. A3H3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28032..29264)
|
Putative major facilitator superfamily transporter n=1 Tax=Halomonas sp. A3H3 RepID=T2L8P6_9GAMM
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:CDG53170.1}; TaxID=1346287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. A3H3.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_29
Halomonas sp. A3H3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29299..30192)
|
dihydrodipicolinate synthase n=1 Tax=Halomonas lutea RepID=UPI00035F73FA
Uncharacterized protein {ECO:0000313|EMBL:CDG53169.1}; TaxID=1346287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. A3H3.;"
dapA; dihydrodipicolinate synthase
|
|
SCNpilot_expt_300_bf_scaffold_601_curated_30
Halomonas sp. A3H3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30308..31609
|
Putative transcriptional regulatory protein PtsJ n=1 Tax=Halomonas sp. A3H3 RepID=T2L7U4_9GAMM
Putative transcriptional regulatory protein PtsJ {ECO:0000313|EMBL:CDG53168.1}; TaxID=1346287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. A3H3.;"
transcriptional regulatory protein PtsJ
|