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SCNpilot_expt_300_bf_scaffold_844_curated_6

Organism: scnpilot_dereplicated_Thiobacillus_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(6103..6393)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI000360D518 similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 96.0
  • Bit_score: 142
  • Evalue 2.60e-31
Pirin {ECO:0000313|EMBL:KGO99441.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 93.0
  • Bit_score: 143
  • Evalue 1.60e-31
virulence associated protein similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 96.0
  • Bit_score: 139
  • Evalue 5.30e-31

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Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGGCCAAACTGAAAAATATTCACCCCGGTGAAATCCTGCTGGAAGAGTTCCTGATTCCCATGGGCATCAGCCAGAATGCCCTGGCGCGCGCAATCAGCGTGCCGCCGCGCCGGGTCAATGAAATCGTATTGGGCAAACGCGGCATCACCGCCGACACGGCGCTGCGCCTGTCGCGCGCATTCGGCACCAGCGAGGGATTCTGGATGGGCCTGCAGGCGGATTACGACCTGGAAGAGACGCGCAAGCTAATCGATGATGTGTTACGGCATGTGGAGAAGCTGGCGGCGTAG
PROTEIN sequence
Length: 97
MAKLKNIHPGEILLEEFLIPMGISQNALARAISVPPRRVNEIVLGKRGITADTALRLSRAFGTSEGFWMGLQADYDLEETRKLIDDVLRHVEKLAA*