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SCNpilot_expt_300_bf_scaffold_844_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_844_curated_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..253)
DNA (252bp) protein (84aa)
heterodisulfide reductase subunit C (EC:1.8.98.1); K03390 heterodisulfide reductase subunit C [EC:1.8.98.1] id=12494660 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
heterodisulfide reductase subunit C (EC:1.8.98.1); K03390 heterodisulfide reductase subunit C [EC:1.8.98.1]
Heterodisulfide reductase subunit C {ECO:0000313|EMBL:AAZ97599.1}; EC=1.8.98.1 {ECO:0000313|EMBL:AAZ97599.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_300_bf_scaffold_844_curated_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(267..2525)
DNA (2259bp) protein (753aa)
Heterodisulfide reductase, subunit A {ECO:0000313|EMBL:AAZ97600.1}; EC=1.8.98.1 {ECO:0000313|EMBL:AAZ97600.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
heterodisulfide reductase subunit A (EC:1.8.98.1); K03388 heterodisulfide reductase subunit A [EC:1.8.98.1]
heterodisulfide reductase n=1 Tax=Thiobacillus thioparus RepID=UPI000371A36D
SCNpilot_expt_300_bf_scaffold_844_curated_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2529..3812)
DNA (1284bp) protein (428aa)
heterodisulfide reductase subunit A (EC:1.8.98.1); K03388 heterodisulfide reductase subunit A [EC:1.8.98.1] id=12494653 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
heterodisulfide reductase subunit A (EC:1.8.98.1); K03388 heterodisulfide reductase subunit A [EC:1.8.98.1]
Heterodisulfide reductase, subunit A {ECO:0000313|EMBL:AAZ97601.1}; EC=1.8.98.1 {ECO:0000313|EMBL:AAZ97601.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_300_bf_scaffold_844_curated_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4105..5736
DNA (1632bp) protein (544aa)
prfC; peptide chain release factor 3; K02837 peptide chain release factor 3 id=12494654 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
prfC; peptide chain release factor 3; K02837 peptide chain release factor 3
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_300_bf_scaffold_844_curated_5
Kingella denitrificans, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5755..6057)
DNA (303bp) protein (101aa)
Addiction module antidote protein HigA n=1 Tax=Kingella denitrificans ATCC 33394 RepID=F0EYD5_9NEIS
Addiction module antidote protein HigA {ECO:0000313|EMBL:EGC17543.1}; TaxID=888741 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella denitrificans ATCC 33394.;"
higA; addiction module antidote protein HigA
SCNpilot_expt_300_bf_scaffold_844_curated_6
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6103..6393)
DNA (291bp) protein (97aa)
XRE family transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI000360D518
Pirin {ECO:0000313|EMBL:KGO99441.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
virulence associated protein
SCNpilot_expt_300_bf_scaffold_844_curated_7
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6407..6688)
DNA (282bp) protein (94aa)
plasmid maintenance system killer protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000370DCBA
Proteic killer suppression protein {ECO:0000313|EMBL:ETC83304.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
plasmid maintenance system killer protein; K07334 proteic killer suppression protein
SCNpilot_expt_300_bf_scaffold_844_curated_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6801..8156)
DNA (1356bp) protein (452aa)
DNA repair protein RadA n=1 Tax=Thiobacillus thioparus RepID=UPI000367B8B8
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_300_bf_scaffold_844_curated_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8183..8470)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037A618F
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_300_bf_scaffold_844_curated_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8473..8754)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2ESK9_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_300_bf_scaffold_844_curated_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8813..9706)
DNA (894bp) protein (298aa)
cysM; cysteine synthase B (EC:2.5.1.47); K12339 cysteine synthase B [EC:2.5.1.47]
cysteine synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00035F9F16
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 11 items

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