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SCNpilot_expt_1000_bf_scaffold_3358_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3358_curated_1
unknown

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comp(80..229)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3358_curated_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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358..3291
DNA (2934bp) protein (978aa)
putative monovalent cation/H+ antiporter subunit A (EC:1.6.99.5); K05559 multicomponent K+:H+ antiporter subunit A
cation:proton antiporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000367A2E8
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_3358_curated_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3291..3635
DNA (345bp) protein (115aa)
cation:proton antiporter n=1 Tax=Thiobacillus denitrificans RepID=UPI0003763921
putative monovalent cation/H+ antiporter subunit C; K05560 multicomponent K+:H+ antiporter subunit C
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_3358_curated_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3632..5146
DNA (1515bp) protein (505aa)
putative monovalent cation/H+ antiporter subunit D (EC:1.6.99.5); K05561 multicomponent K+:H+ antiporter subunit D
NADH dehydrogenase (Quinone) id=1342797 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_3358_curated_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5143..5640
DNA (498bp) protein (166aa)
putative monovalent cation/H+ antiporter subunit E; K05562 multicomponent K+:H+ antiporter subunit E
Multicomponent K+:H+ antiporter subunit E id=1342796 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_3358_curated_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5640..5909
DNA (270bp) protein (90aa)
Multisubunit Na+/H+ antiporter, subunit F id=1342795 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
multisubunit Na+/H+ antiporter subunit F; K05563 multicomponent K+:H+ antiporter subunit F
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_3358_curated_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5920..6258
DNA (339bp) protein (113aa)
Na+/H+ antiporter subunit id=1342794 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
monovalent cation/H+ antiporter subunit G; K05564 multicomponent K+:H+ antiporter subunit G
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_3358_curated_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6255..6962)
DNA (708bp) protein (236aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] id=12493806 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_3358_curated_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6959..7747)
DNA (789bp) protein (263aa)
thiazole synthase n=1 Tax=Thiobacillus thioparus RepID=UPI0003678A68
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_3358_curated_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7798..8001)
DNA (204bp) protein (68aa)
thiamine biosynthesis protein ThiS n=1 Tax=Thiobacillus thioparus RepID=UPI0003600A30
thiamine-biosynthesis protein ThiS; K03154 sulfur carrier protein
Thiamine-biosynthesis protein ThiS {ECO:0000313|EMBL:AAZ98080.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 10 items

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